PlantSME Plant secondary metabolism enzyme database

Corylus heterophylla (corylus_heterophylla)

Imported from atlas release summary for Corylus heterophylla.

1989
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.47% Alkaloid pathway 22.12% Phenylpropanoid pathway 19.0% Flavonoid pathway 14.03% Rosmarinic acid pathway 7.69% Steroid pathway 6.69%
Family Distribution
C3'H/CYP98A 5.73% UGT 5.66% C4H 5.55% BAHD 5.55% 7DLGT 5.07% UFGT 4.83% IFS 3.67% CYP76 3.51%
Other Families 60.42%
More Families (98)
T3O 158 3.47% POD 150 3.29% 4CL 129 2.83% F3H 122 2.68% DWF4/CYP90B1 112 2.46% NMT 93 2.04% CAD 93 2.04% F3'H/CYP75B 83 1.82% CODM/T6ODM 79 1.73% CAS 79 1.73% STR 72 1.58% LAC 68 1.49% SMT1/SMT2/SMT3 65 1.43% TRI/TRII 62 1.36% BR6OX2/CYP85A2 62 1.36% COMT 59 1.3% CYP71 51 1.12% H6H 49 1.08% TPS 47 1.03% GES 46 1.01% HCT 46 1.01% CYP90D1 41 0.9% ANR 40 0.88% GS 39 0.86% RAS 39 0.86% G8O/G8H 37 0.81% T16H 37 0.81% SGD 36 0.79% PMT 35 0.77% TAT 35 0.77% 16OMT 34 0.75% IFR 32 0.7% CCR 28 0.61% PYKS 27 0.59% BBE 27 0.59% PAL 27 0.59% CSE 27 0.59% FNS 25 0.55% BR6OX1/CYP85A1 24 0.53% SLS 22 0.48% NCS 21 0.46% CPD/CYP90A1 21 0.46% IO 20 0.44% 7DLH 20 0.44% COR 19 0.42% 8HGO 19 0.42% F5H/CYP84A 18 0.4% F3'5'H/CYP75A 17 0.37% CYP51G1 17 0.37% CNMT 16 0.35% LAMT 16 0.35% CCoAOMT 15 0.33% ANS/LDOX 13 0.29% ISY 11 0.24% DFR 11 0.24% FPPS 10 0.22% HPPR 9 0.2% ROT3/CYP90C1 9 0.2% MPO 8 0.18% AACT 8 0.18% DET2 7 0.15% DXS 7 0.15% 6OMT_4OMT_SOMT 6 0.13% CYP80B1 6 0.13% CPR 6 0.13% MVD 6 0.13% GGPPS 6 0.13% TYDC_DDC 5 0.11% CHS 5 0.11% CHI 5 0.11% SQS/FDFT1 5 0.11% ADC 4 0.09% MVK 4 0.09% PMK 4 0.09% TDC 3 0.07% FLS 3 0.07% SQE 3 0.07% SMO1/SMO2 3 0.07% HMGR 3 0.07% XMT_MXMT_DXMT 2 0.04% CYP719 2 0.04% CPI1 2 0.04% MCT/IspD 2 0.04% MDS/IspF 2 0.04% HMGS 2 0.04% HDS/IspG 2 0.04% CYP80F1 1 0.02% ODC 1 0.02% DWF1 1 0.02% HYD1 1 0.02% DWF7 1 0.02% DWF5 1 0.02% FK 1 0.02% HDR/IspH 1 0.02% IDI 1 0.02% GPPS 1 0.02% DXR 1 0.02% CMK/IspE 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 606 21 UGT (242) View species results
Alkaloid pathway 440 24 7DLGT (120) View species results
Phenylpropanoid pathway 378 11 POD (139) View species results
Flavonoid pathway 279 9 UFGT (206) View species results
Rosmarinic acid pathway 153 7 C4H (56) View species results
Steroid pathway 133 11 CAS (75) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1599 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 338 BAHD, HCT, RAS
Identification Result List
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Gene Pathway Family Confidence Status
ChetContig004080004580.1 Alkaloid T3O medium borderline
ChetContig005000006770.1 Alkaloid T3O low borderline
ChetContig005000006790.1 Alkaloid T3O low borderline
ChetContig005090007110.1 Alkaloid T3O medium borderline
ChetContig005210007320.1 Alkaloid T3O medium borderline
ChetContig006370008960.1 Alkaloid T3O medium borderline
ChetContig007460010120.1 Alkaloid T3O medium borderline
ChetContig011280013120.1 Alkaloid T3O medium pass