Cuscuta campestris (cuscuta_campestris)
Imported from atlas release summary for Cuscuta campestris.
1565
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1565
Candidate Genes
BAHD
7.99%
4CL
5.44%
C3'H/CYP98A
4.96%
C4H
4.63%
NMT
4.25%
POD
3.87%
UGT
3.85%
UFGT
3.58%
Other Families
61.43%
More Families (96)
7DLGT
130
3.52%
IFS
117
3.17%
CYP76
114
3.09%
T3O
108
2.93%
STR
96
2.6%
DWF4/CYP90B1
84
2.28%
SMT1/SMT2/SMT3
84
2.28%
F3H
64
1.73%
CAD
61
1.65%
CSE
56
1.52%
BR6OX2/CYP85A2
53
1.44%
GS
52
1.41%
CYP71
51
1.38%
CODM/T6ODM
48
1.3%
PYKS
48
1.3%
TRI/TRII
47
1.27%
F3'H/CYP75B
43
1.16%
IFR
42
1.14%
CAS
42
1.14%
LAC
39
1.06%
RAS
38
1.03%
H6H
37
1.0%
HCT
36
0.98%
TPS
30
0.81%
BBE
29
0.79%
GES
29
0.79%
FNS
28
0.76%
8HGO
26
0.7%
CCR
26
0.7%
PMT
25
0.68%
SGD
25
0.68%
IO
24
0.65%
ANR
24
0.65%
F3'5'H/CYP75A
21
0.57%
COMT
20
0.54%
T16H
18
0.49%
7DLH
18
0.49%
PAL
18
0.49%
SLS
17
0.46%
CHS
16
0.43%
TAT
16
0.43%
CPD/CYP90A1
16
0.43%
ANS/LDOX
15
0.41%
CPR
15
0.41%
G8O/G8H
14
0.38%
CYP719
14
0.38%
LAMT
14
0.38%
MPO
13
0.35%
CYP90D1
13
0.35%
CYP51G1
13
0.35%
AACT
13
0.35%
CNMT
12
0.33%
MVK
11
0.3%
GGPPS
11
0.3%
ROT3/CYP90C1
10
0.27%
MCT/IspD
10
0.27%
CCoAOMT
9
0.24%
SQS/FDFT1
9
0.24%
16OMT
8
0.22%
F5H/CYP84A
8
0.22%
SMO1/SMO2
8
0.22%
TYDC_DDC
7
0.19%
HPPR
7
0.19%
CPI1
7
0.19%
DFR
6
0.16%
CHI
6
0.16%
DET2
6
0.16%
FPPS
6
0.16%
MVD
6
0.16%
XMT_MXMT_DXMT
5
0.14%
ADC
5
0.14%
IDI
5
0.14%
HMGR
5
0.14%
PMK
5
0.14%
ISY
4
0.11%
COR
4
0.11%
TDC
4
0.11%
BR6OX1/CYP85A1
4
0.11%
FK
4
0.11%
NCS
3
0.08%
SQE
3
0.08%
DWF7
3
0.08%
CMK/IspE
3
0.08%
CYP80F1
2
0.05%
ODC
2
0.05%
CYP80B1
2
0.05%
FLS
2
0.05%
DWF1
2
0.05%
HYD1
2
0.05%
DWF5
2
0.05%
DXS
2
0.05%
MDS/IspF
2
0.05%
HMGS
2
0.05%
HDS/IspG
2
0.05%
HDR/IspH
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 483 | 20 | BAHD (216) | View species results |
| Alkaloid pathway | 334 | 20 | NMT (95) | View species results |
| Phenylpropanoid pathway | 319 | 11 | POD (130) | View species results |
| Flavonoid pathway | 204 | 9 | UFGT (124) | View species results |
| Rosmarinic acid pathway | 120 | 7 | 4CL (41) | View species results |
| Steroid pathway | 105 | 12 | SMT1/SMT2/SMT3 (41) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1118 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 369 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| CcamCcam0.32_scaffold10001510.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| CcamCcam0.32_scaffold1010011550.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| CcamCcam0.32_scaffold1010012020.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| CcamCcam0.32_scaffold1020012830.1 | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| CcamCcam0.32_scaffold110021470.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| CcamCcam0.32_scaffold1110026750.1 | Alkaloid | NMT | low | borderline | NMT__00033__sp_Q5QD03_SUVH3_CHLRE |
| CcamCcam0.32_scaffold1110026800.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| CcamCcam0.32_scaffold1130030920.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| CcamCcam0.32_scaffold1140031910.1 | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| CcamCcam0.32_scaffold1150032840.1 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| CcamCcam0.32_scaffold1160034310.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| CcamCcam0.32_scaffold1160034310.2 | Alkaloid | NMT | medium | pass | NMT__00033__sp_Q5QD03_SUVH3_CHLRE |
| CcamCcam0.32_scaffold1190039990.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| CcamCcam0.32_scaffold120042610.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| CcamCcam0.32_scaffold1230049220.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| CcamCcam0.32_scaffold1250051220.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| CcamCcam0.32_scaffold1250051470.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| CcamCcam0.32_scaffold1270053530.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| CcamCcam0.32_scaffold1270053530.2 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| CcamCcam0.32_scaffold1270053540.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| CcamCcam0.32_scaffold1270053540.2 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| CcamCcam0.32_scaffold1280055150.1 | Alkaloid | NMT | low | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| CcamCcam0.32_scaffold1280055150.2 | Alkaloid | NMT | low | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| CcamCcam0.32_scaffold1290055650.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| CcamCcam0.32_scaffold1300056620.1 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| CcamCcam0.32_scaffold1330060050.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| CcamCcam0.32_scaffold1330060050.2 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| CcamCcam0.32_scaffold1360063210.1 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| CcamCcam0.32_scaffold1360063210.2 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| CcamCcam0.32_scaffold1360063210.3 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| CcamCcam0.32_scaffold1380065610.1 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| CcamCcam0.32_scaffold139a0066840.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| CcamCcam0.32_scaffold13b0067980.1 | Alkaloid | NMT | low | borderline | NMT__00033__sp_Q5QD03_SUVH3_CHLRE |
| CcamCcam0.32_scaffold13b0068020.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| CcamCcam0.32_scaffold13b0068020.2 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| CcamCcam0.32_scaffold13b0068020.3 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| CcamCcam0.32_scaffold13b0068030.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| CcamCcam0.32_scaffold13b0068030.2 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| CcamCcam0.32_scaffold1450077530.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| CcamCcam0.32_scaffold1450077740.1 | Alkaloid | NMT | low | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| CcamCcam0.32_scaffold1450077740.2 | Alkaloid | NMT | low | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| CcamCcam0.32_scaffold1450077910.1 | Alkaloid | NMT | medium | pass | NMT__00019__sp_O22781_SUVH2_ARATH |
| CcamCcam0.32_scaffold14b0085140.1 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| CcamCcam0.32_scaffold1500089100.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| CcamCcam0.32_scaffold1530091670.1 | Alkaloid | NMT | medium | pass | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| CcamCcam0.32_scaffold1560093970.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| CcamCcam0.32_scaffold1590096520.1 | Alkaloid | NMT | medium | borderline | NMT__00045__sp_Q8VYX1_PEAM1_WHEAT |
| CcamCcam0.32_scaffold1600101250.1 | Alkaloid | NMT | low | borderline | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| CcamCcam0.32_scaffold1600101250.2 | Alkaloid | NMT | low | borderline | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| CcamCcam0.32_scaffold1600101290.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |