Daucus carota (daucus_carota)
Imported from atlas release summary for Daucus carota.
1540
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1540
Candidate Genes
BAHD
6.65%
C4H
6.42%
C3'H/CYP98A
5.74%
UGT
4.17%
CYP76
4.05%
4CL
3.86%
IFS
3.33%
POD
3.26%
Other Families
62.53%
More Families (95)
7DLGT
138
3.23%
T3O
133
3.11%
UFGT
129
3.02%
F3H
121
2.83%
F3'H/CYP75B
98
2.3%
DWF4/CYP90B1
92
2.15%
STR
89
2.08%
NMT
85
1.99%
CODM/T6ODM
78
1.83%
BR6OX2/CYP85A2
77
1.8%
BBE
68
1.59%
CAD
62
1.45%
H6H
60
1.41%
SMT1/SMT2/SMT3
57
1.33%
CYP71
56
1.31%
HCT
53
1.24%
TRI/TRII
52
1.22%
TAT
50
1.17%
PMT
48
1.12%
PYKS
47
1.1%
G8O/G8H
45
1.05%
GS
43
1.01%
IFR
41
0.96%
CAS
41
0.96%
LAC
39
0.91%
SLS
38
0.89%
TPS
38
0.89%
GES
37
0.87%
NCS
36
0.84%
T16H
34
0.8%
FNS
34
0.8%
ANR
31
0.73%
F5H/CYP84A
31
0.73%
CSE
31
0.73%
IO
29
0.68%
ANS/LDOX
28
0.66%
RAS
28
0.66%
CYP51G1
27
0.63%
CYP90D1
24
0.56%
7DLH
22
0.52%
F3'5'H/CYP75A
22
0.52%
BR6OX1/CYP85A1
21
0.49%
COMT
19
0.44%
CCR
19
0.44%
COR
18
0.42%
SGD
18
0.42%
CHS
17
0.4%
8HGO
13
0.3%
LAMT
11
0.26%
CCoAOMT
11
0.26%
ROT3/CYP90C1
11
0.26%
CPD/CYP90A1
11
0.26%
GGPPS
11
0.26%
16OMT
10
0.23%
CYP719
10
0.23%
DFR
10
0.23%
CPR
10
0.23%
PAL
9
0.21%
TYDC_DDC
8
0.19%
CYP80B1
8
0.19%
XMT_MXMT_DXMT
8
0.19%
SQS/FDFT1
8
0.19%
FPPS
8
0.19%
MPO
7
0.16%
HPPR
7
0.16%
SQE
7
0.16%
SMO1/SMO2
7
0.16%
AACT
7
0.16%
CNMT
5
0.12%
DET2
5
0.12%
PMK
5
0.12%
ISY
4
0.09%
TDC
4
0.09%
MVK
4
0.09%
CMK/IspE
4
0.09%
MVD
4
0.09%
DXS
4
0.09%
FLS
3
0.07%
CHI
3
0.07%
DWF1
3
0.07%
CPI1
3
0.07%
MCT/IspD
3
0.07%
HMGR
3
0.07%
HDR/IspH
3
0.07%
DWF7
2
0.05%
HDS/IspG
2
0.05%
DXR
2
0.05%
6OMT_4OMT_SOMT
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
HYD1
1
0.02%
GPPS
1
0.02%
MDS/IspF
1
0.02%
HMGS
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 497 | 19 | BAHD (204) | View species results |
| Alkaloid pathway | 343 | 20 | NMT (51) | View species results |
| Phenylpropanoid pathway | 280 | 12 | POD (127) | View species results |
| Flavonoid pathway | 194 | 12 | UFGT (116) | View species results |
| Rosmarinic acid pathway | 149 | 7 | C4H (53) | View species results |
| Steroid pathway | 77 | 11 | SMT1/SMT2/SMT3 (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1623 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 365 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Dcar04G0017420.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar04G0017620.1 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| Dcar04G0024350.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Dcar04G0026120.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar04G0028200.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar04G0029890.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar05G0001190.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar05G0001660.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar05G0001750.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar05G0008370.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar05G0009980.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar05G0010930.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar05G0021790.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar05G0021800.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar05G0029440.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar06G0004030.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar06G0006000.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Dcar06G0018160.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar06G0025940.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar06G0027140.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Dcar06G0027150.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Dcar06G0027160.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Dcar07G0001230.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar07G0004280.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar07G0011350.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar07G0030810.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar07G0030820.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar07G0030830.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar08G0006300.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Dcar08G0012390.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar08G0019790.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar09G0002620.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar09G0009780.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar09G0010760.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar09G0010770.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcar09G0020150.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DcarDCARv2_B260002520.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DcarDCARv2_B260002540.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DcarDCARv2_C107472180006230.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |