Daucus carota (daucus_carota)
Imported from atlas release summary for Daucus carota.
1540
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1540
Candidate Genes
BAHD
6.65%
C4H
6.42%
C3'H/CYP98A
5.74%
UGT
4.17%
CYP76
4.05%
4CL
3.86%
IFS
3.33%
POD
3.26%
Other Families
62.53%
More Families (95)
7DLGT
138
3.23%
T3O
133
3.11%
UFGT
129
3.02%
F3H
121
2.83%
F3'H/CYP75B
98
2.3%
DWF4/CYP90B1
92
2.15%
STR
89
2.08%
NMT
85
1.99%
CODM/T6ODM
78
1.83%
BR6OX2/CYP85A2
77
1.8%
BBE
68
1.59%
CAD
62
1.45%
H6H
60
1.41%
SMT1/SMT2/SMT3
57
1.33%
CYP71
56
1.31%
HCT
53
1.24%
TRI/TRII
52
1.22%
TAT
50
1.17%
PMT
48
1.12%
PYKS
47
1.1%
G8O/G8H
45
1.05%
GS
43
1.01%
IFR
41
0.96%
CAS
41
0.96%
LAC
39
0.91%
SLS
38
0.89%
TPS
38
0.89%
GES
37
0.87%
NCS
36
0.84%
T16H
34
0.8%
FNS
34
0.8%
ANR
31
0.73%
F5H/CYP84A
31
0.73%
CSE
31
0.73%
IO
29
0.68%
ANS/LDOX
28
0.66%
RAS
28
0.66%
CYP51G1
27
0.63%
CYP90D1
24
0.56%
7DLH
22
0.52%
F3'5'H/CYP75A
22
0.52%
BR6OX1/CYP85A1
21
0.49%
COMT
19
0.44%
CCR
19
0.44%
COR
18
0.42%
SGD
18
0.42%
CHS
17
0.4%
8HGO
13
0.3%
LAMT
11
0.26%
CCoAOMT
11
0.26%
ROT3/CYP90C1
11
0.26%
CPD/CYP90A1
11
0.26%
GGPPS
11
0.26%
16OMT
10
0.23%
CYP719
10
0.23%
DFR
10
0.23%
CPR
10
0.23%
PAL
9
0.21%
TYDC_DDC
8
0.19%
CYP80B1
8
0.19%
XMT_MXMT_DXMT
8
0.19%
SQS/FDFT1
8
0.19%
FPPS
8
0.19%
MPO
7
0.16%
HPPR
7
0.16%
SQE
7
0.16%
SMO1/SMO2
7
0.16%
AACT
7
0.16%
CNMT
5
0.12%
DET2
5
0.12%
PMK
5
0.12%
ISY
4
0.09%
TDC
4
0.09%
MVK
4
0.09%
CMK/IspE
4
0.09%
MVD
4
0.09%
DXS
4
0.09%
FLS
3
0.07%
CHI
3
0.07%
DWF1
3
0.07%
CPI1
3
0.07%
MCT/IspD
3
0.07%
HMGR
3
0.07%
HDR/IspH
3
0.07%
DWF7
2
0.05%
HDS/IspG
2
0.05%
DXR
2
0.05%
6OMT_4OMT_SOMT
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
HYD1
1
0.02%
GPPS
1
0.02%
MDS/IspF
1
0.02%
HMGS
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 497 | 19 | BAHD (204) | View species results |
| Alkaloid pathway | 343 | 20 | NMT (51) | View species results |
| Phenylpropanoid pathway | 280 | 12 | POD (127) | View species results |
| Flavonoid pathway | 194 | 12 | UFGT (116) | View species results |
| Rosmarinic acid pathway | 149 | 7 | C4H (53) | View species results |
| Steroid pathway | 77 | 11 | SMT1/SMT2/SMT3 (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1623 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 365 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Dcar01G0005800.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Dcar01G0014960.1 | Flavonoid | 4CL | low | borderline | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| Dcar01G0019030.1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Dcar01G0024630.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Dcar01G0025030.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Dcar01G0030600.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Dcar01G0031040.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Dcar02G0000120.1 | Flavonoid | 4CL | low | borderline | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |
| Dcar02G0000130.1 | Flavonoid | 4CL | low | borderline | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |
| Dcar02G0002160.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Dcar02G0002410.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Dcar02G0013060.1 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Dcar02G0013070.1 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Dcar02G0015890.1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Dcar02G0033950.1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Dcar02G0038610.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Dcar03G0000730.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Dcar03G0006980.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Dcar03G0008520.1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Dcar03G0024270.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Dcar03G0029510.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Dcar03G0029540.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Dcar03G0036520.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Dcar04G0017580.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Dcar04G0019320.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Dcar04G0019400.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Dcar04G0019840.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Dcar04G0021570.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Dcar04G0021580.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Dcar04G0021710.1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Dcar05G0003400.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Dcar05G0006320.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Dcar05G0013610.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Dcar05G0016350.1 | Flavonoid | 4CL | low | borderline | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Dcar05G0027120.1 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Dcar05G0036010.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Dcar06G0010400.1 | Flavonoid | 4CL | medium | pass | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| Dcar06G0011060.1 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Dcar06G0011910.1 | Flavonoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| Dcar06G0018880.1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Dcar06G0030280.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Dcar07G0000620.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Dcar07G0013300.1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Dcar07G0024020.1 | Flavonoid | 4CL | medium | pass | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| Dcar07G0029990.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Dcar07G0031200.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Dcar08G0005620.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Dcar08G0012320.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Dcar08G0013120.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Dcar08G0017480.1 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |