Daucus carota (daucus_carota)
Imported from atlas release summary for Daucus carota.
2057
Candidate Protein Records
1540
Pathway-Level Records
4270
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4270
Family-Level Calls
BAHD
6.65%
C4H
6.42%
C3'H/CYP98A
5.74%
UGT
4.17%
CYP76
4.05%
4CL
3.86%
IFS
3.33%
POD
3.26%
Other Families
62.53%
More Families (95)
7DLGT
138
3.23%
T3O
133
3.11%
UFGT
129
3.02%
F3H
121
2.83%
F3'H/CYP75B
98
2.3%
DWF4/CYP90B1
92
2.15%
STR
89
2.08%
NMT
85
1.99%
CODM/T6ODM
78
1.83%
BR6OX2/CYP85A2
77
1.8%
BBE
68
1.59%
CAD
62
1.45%
H6H
60
1.41%
SMT1/SMT2/SMT3
57
1.33%
CYP71
56
1.31%
HCT
53
1.24%
TRI/TRII
52
1.22%
TAT
50
1.17%
PMT
48
1.12%
PYKS
47
1.1%
G8O/G8H
45
1.05%
GS
43
1.01%
IFR
41
0.96%
CAS
41
0.96%
LAC
39
0.91%
SLS
38
0.89%
TPS
38
0.89%
GES
37
0.87%
NCS
36
0.84%
T16H
34
0.8%
FNS
34
0.8%
ANR
31
0.73%
F5H/CYP84A
31
0.73%
CSE
31
0.73%
IO
29
0.68%
ANS/LDOX
28
0.66%
RAS
28
0.66%
CYP51G1
27
0.63%
CYP90D1
24
0.56%
7DLH
22
0.52%
F3'5'H/CYP75A
22
0.52%
BR6OX1/CYP85A1
21
0.49%
COMT
19
0.44%
CCR
19
0.44%
COR
18
0.42%
SGD
18
0.42%
CHS
17
0.4%
8HGO
13
0.3%
LAMT
11
0.26%
CCoAOMT
11
0.26%
ROT3/CYP90C1
11
0.26%
CPD/CYP90A1
11
0.26%
GGPPS
11
0.26%
16OMT
10
0.23%
CYP719
10
0.23%
DFR
10
0.23%
CPR
10
0.23%
PAL
9
0.21%
TYDC_DDC
8
0.19%
CYP80B1
8
0.19%
XMT_MXMT_DXMT
8
0.19%
SQS/FDFT1
8
0.19%
FPPS
8
0.19%
MPO
7
0.16%
HPPR
7
0.16%
SQE
7
0.16%
SMO1/SMO2
7
0.16%
AACT
7
0.16%
CNMT
5
0.12%
DET2
5
0.12%
PMK
5
0.12%
ISY
4
0.09%
TDC
4
0.09%
MVK
4
0.09%
CMK/IspE
4
0.09%
MVD
4
0.09%
DXS
4
0.09%
FLS
3
0.07%
CHI
3
0.07%
DWF1
3
0.07%
CPI1
3
0.07%
MCT/IspD
3
0.07%
HMGR
3
0.07%
HDR/IspH
3
0.07%
DWF7
2
0.05%
HDS/IspG
2
0.05%
DXR
2
0.05%
6OMT_4OMT_SOMT
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
HYD1
1
0.02%
GPPS
1
0.02%
MDS/IspF
1
0.02%
HMGS
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 497 | 19 | BAHD (204) | View species results |
| Alkaloid pathway | 343 | 20 | NMT (51) | View species results |
| Phenylpropanoid pathway | 280 | 12 | POD (127) | View species results |
| Flavonoid pathway | 194 | 12 | UFGT (116) | View species results |
| Rosmarinic acid pathway | 149 | 7 | C4H (53) | View species results |
| Steroid pathway | 77 | 11 | SMT1/SMT2/SMT3 (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1623 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 365 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Dcar03G0017510.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| Dcar03G0030020.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Dcar03G0030580.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| Dcar03G0030600.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| Dcar03G0034520.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| Dcar03G0036450.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar04G0004550.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Dcar04G0007180.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Dcar04G0015950.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar04G0026480.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar04G0026490.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar04G0026500.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Dcar04G0028820.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar05G0007970.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| Dcar05G0022970.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar05G0025920.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Dcar05G0027880.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar06G0010910.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Dcar06G0012420.1 | Alkaloid | TRI/TRII | medium | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| Dcar06G0017360.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar06G0033550.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Dcar07G0006170.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| Dcar07G0006520.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Dcar07G0028630.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Dcar07G0031110.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| Dcar08G0000390.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Dcar08G0001710.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Dcar08G0001730.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| Dcar08G0001740.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Dcar08G0020920.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar08G0020930.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar08G0020940.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar08G0020950.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar08G0020960.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Dcar08G0024550.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| Dcar09G0004880.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Dcar09G0004890.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Dcar09G0006890.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Dcar09G0006910.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Dcar09G0015200.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Dcar09G0019890.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Dcar01G0000690.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH |
| Dcar01G0028330.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Dcar01G0036340.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Dcar02G0030630.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Dcar03G0032080.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Dcar03G0032090.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Dcar03G0032100.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Dcar04G0016450.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Dcar01G0020200.1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline | XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA |