PlantSME Plant secondary metabolism enzyme database

Davidia involucrata (davidia_involucrata)

Imported from atlas release summary for Davidia involucrata.

3676
Candidate Protein Records
2692
Pathway-Level Records
6836
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 29.42% Alkaloid pathway 23.74% Phenylpropanoid pathway 20.84% Steroid pathway 9.18% Flavonoid pathway 8.77% Rosmarinic acid pathway 8.06%
Family Distribution
BAHD 6.89% C4H 5.31% C3'H/CYP98A 5.06% 4CL 4.61% F3H 3.85% POD 3.74% IFS 3.39% UGT 3.12%
Other Families 64.03%
More Families (96)
NMT 212 3.1% CYP76 203 2.97% T3O 187 2.74% DWF4/CYP90B1 156 2.28% 7DLGT 153 2.24% SMT1/SMT2/SMT3 146 2.14% STR 139 2.03% CODM/T6ODM 126 1.84% UFGT 125 1.83% CAS 123 1.8% SGD 119 1.74% IFR 115 1.68% H6H 113 1.65% CAD 111 1.62% LAC 109 1.59% F3'H/CYP75B 106 1.55% TRI/TRII 89 1.3% CYP71 89 1.3% BR6OX2/CYP85A2 80 1.17% CYP90D1 66 0.97% GES 65 0.95% NCS 63 0.92% TPS 63 0.92% GS 62 0.91% COMT 61 0.89% CSE 60 0.88% T16H 57 0.83% HCT 57 0.83% 7DLH 56 0.82% FNS 56 0.82% RAS 55 0.8% SLS 52 0.76% IO 50 0.73% PMT 48 0.7% PYKS 44 0.64% TAT 44 0.64% LAMT 41 0.6% 8HGO 40 0.59% COR 39 0.57% F3'5'H/CYP75A 39 0.57% CPD/CYP90A1 37 0.54% CCR 35 0.51% ANR 33 0.48% BR6OX1/CYP85A1 32 0.47% PAL 30 0.44% AACT 29 0.42% DFR 26 0.38% ROT3/CYP90C1 26 0.38% CYP51G1 25 0.37% 16OMT 24 0.35% G8O/G8H 24 0.35% MPO 22 0.32% ANS/LDOX 22 0.32% MCT/IspD 21 0.31% SQE 20 0.29% DXS 19 0.28% BBE 17 0.25% CPR 17 0.25% SMO1/SMO2 17 0.25% FPPS 17 0.25% TYDC_DDC 16 0.23% HPPR 16 0.23% F5H/CYP84A 14 0.2% GGPPS 14 0.2% CNMT 13 0.19% CHS 13 0.19% SQS/FDFT1 13 0.19% HMGR 13 0.19% CYP719 12 0.18% ISY 11 0.16% CCoAOMT 10 0.15% PMK 10 0.15% MVK 9 0.13% MVD 9 0.13% TDC 8 0.12% CYP80B1 7 0.1% CMK/IspE 7 0.1% ODC 6 0.09% FK 5 0.07% HDR/IspH 5 0.07% IDI 5 0.07% HDS/IspG 5 0.07% 6OMT_4OMT_SOMT 4 0.06% XMT_MXMT_DXMT 4 0.06% CHI 4 0.06% DWF1 4 0.06% CPI1 4 0.06% DWF7 4 0.06% HMGS 4 0.06% DXR 4 0.06% ADC 3 0.04% DET2 3 0.04% CYP80F1 2 0.03% DWF5 2 0.03% FLS 1 0.01% MDS/IspF 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 792 20 BAHD (377) View species results
Alkaloid pathway 639 25 SGD (117) View species results
Phenylpropanoid pathway 561 11 POD (227) View species results
Steroid pathway 247 12 CAS (100) View species results
Flavonoid pathway 236 14 UFGT (89) View species results
Rosmarinic acid pathway 217 7 C4H (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2261 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Dinv19G0008160.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Dinv20G0006840.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Dinv20G0006840.2 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Dinv20G0009120.1 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Dinv20G0009120.2 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Dinv20G0010250.1 Rosmarinic Acid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
Dinv20G0010260.1 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Dinv20G0015850.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Dinv20G0016020.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Dinv20G0016030.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Dinv20G0016030.2 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Dinv20G0016760.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Dinv20G0016780.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
DinvGWHABJS000000850001500.1 Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
DinvGWHABJS000000850007850.1 Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY