PlantSME Plant secondary metabolism enzyme database

Dillenia turbinata (dillenia_turbinata)

Imported from atlas release summary for Dillenia turbinata.

1870
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 32.03% Alkaloid pathway 22.62% Phenylpropanoid pathway 21.39% Flavonoid pathway 10.05% Steroid pathway 7.54% Rosmarinic acid pathway 6.36%
Family Distribution
C4H 6.55% C3'H/CYP98A 5.15% BAHD 5.11% CYP76 4.47% POD 4.12% UGT 3.54% 4CL 3.46% F3H 3.03%
Other Families 64.56%
More Families (98)
IFS 145 2.99% 7DLGT 141 2.91% CAD 124 2.56% DWF4/CYP90B1 121 2.49% UFGT 116 2.39% F3'H/CYP75B 115 2.37% T3O 114 2.35% NMT 107 2.2% CODM/T6ODM 88 1.81% G8O/G8H 88 1.81% CAS 79 1.63% GES 77 1.59% TPS 77 1.59% H6H 74 1.52% SMT1/SMT2/SMT3 70 1.44% STR 69 1.42% LAC 63 1.3% BR6OX2/CYP85A2 57 1.17% COMT 56 1.15% T16H 55 1.13% GS 55 1.13% FNS 55 1.13% IFR 55 1.13% IO 53 1.09% F3'5'H/CYP75A 49 1.01% F5H/CYP84A 48 0.99% PYKS 46 0.95% ANR 46 0.95% LAMT 45 0.93% CYP71 44 0.91% SLS 37 0.76% CYP90D1 35 0.72% TRI/TRII 34 0.7% SGD 34 0.7% TAT 34 0.7% HCT 32 0.66% 16OMT 31 0.64% CPD/CYP90A1 30 0.62% 7DLH 28 0.58% 8HGO 28 0.58% CSE 28 0.58% PMT 27 0.56% DFR 25 0.52% CCR 25 0.52% CNMT 19 0.39% COR 18 0.37% ANS/LDOX 18 0.37% NCS 17 0.35% RAS 16 0.33% PAL 15 0.31% BR6OX1/CYP85A1 15 0.31% CYP719 13 0.27% MPO 13 0.27% AACT 12 0.25% CCoAOMT 11 0.23% CYP51G1 10 0.21% SQE 10 0.21% DXS 10 0.21% CHS 9 0.19% DET2 9 0.19% ROT3/CYP90C1 9 0.19% GGPPS 9 0.19% HPPR 8 0.16% MVK 8 0.16% CPR 7 0.14% TDC 6 0.12% FPPS 6 0.12% MVD 6 0.12% BBE 5 0.1% TYDC_DDC 5 0.1% ISY 5 0.1% 6OMT_4OMT_SOMT 5 0.1% CHI 5 0.1% HYD1 5 0.1% SQS/FDFT1 5 0.1% HDR/IspH 5 0.1% ODC 4 0.08% ADC 4 0.08% DWF1 4 0.08% SMO1/SMO2 4 0.08% HMGR 4 0.08% MCT/IspD 4 0.08% CYP80B1 3 0.06% CPI1 3 0.06% IDI 3 0.06% CMK/IspE 3 0.06% PMK 3 0.06% XMT_MXMT_DXMT 2 0.04% CYP80F1 2 0.04% FK 2 0.04% DWF7 2 0.04% DWF5 2 0.04% DXR 2 0.04% HDS/IspG 2 0.04% HMGS 2 0.04% MDS/IspF 2 0.04% FLS 1 0.02% GPPS 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 599 20 BAHD (194) View species results
Alkaloid pathway 423 26 GES (64) View species results
Phenylpropanoid pathway 400 13 POD (171) View species results
Flavonoid pathway 188 11 UFGT (100) View species results
Steroid pathway 141 12 CAS (69) View species results
Rosmarinic acid pathway 119 7 4CL (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1856 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 296 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status Best Target
dillenia_turbinata_DITU_031157-RA Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
dillenia_turbinata_DITU_033020-RA Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
dillenia_turbinata_DITU_033023-RA Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO