Diospyros lotus (diospyros_lotus)
Imported from atlas release summary for Diospyros lotus.
2456
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2456
Candidate Genes
BAHD
5.85%
C4H
5.52%
C3'H/CYP98A
5.19%
UGT
4.33%
CYP76
3.86%
7DLGT
3.81%
UFGT
3.76%
F3H
3.73%
Other Families
63.94%
More Families (97)
POD
204
3.55%
IFS
189
3.29%
T3O
177
3.08%
CODM/T6ODM
140
2.44%
4CL
138
2.4%
NMT
128
2.23%
TPS
114
1.98%
CAD
109
1.9%
GES
106
1.85%
F3'H/CYP75B
103
1.79%
DWF4/CYP90B1
103
1.79%
TRI/TRII
97
1.69%
COMT
90
1.57%
BR6OX2/CYP85A2
88
1.53%
H6H
87
1.51%
STR
86
1.5%
16OMT
78
1.36%
CAS
72
1.25%
SMT1/SMT2/SMT3
66
1.15%
PYKS
65
1.13%
CSE
65
1.13%
LAC
62
1.08%
G8O/G8H
53
0.92%
SGD
52
0.91%
BBE
50
0.87%
NCS
49
0.85%
IFR
46
0.8%
DFR
43
0.75%
CYP90D1
43
0.75%
IO
39
0.68%
F3'5'H/CYP75A
39
0.68%
CYP71
39
0.68%
ANR
38
0.66%
HCT
38
0.66%
T16H
37
0.64%
GS
37
0.64%
FNS
37
0.64%
TAT
35
0.61%
CHS
34
0.59%
F5H/CYP84A
33
0.57%
PMT
32
0.56%
CCR
31
0.54%
CPD/CYP90A1
29
0.5%
BR6OX1/CYP85A1
28
0.49%
SLS
26
0.45%
RAS
23
0.4%
ANS/LDOX
22
0.38%
CPR
22
0.38%
PAL
21
0.37%
CYP51G1
21
0.37%
7DLH
20
0.35%
COR
20
0.35%
8HGO
19
0.33%
ROT3/CYP90C1
18
0.31%
CCoAOMT
15
0.26%
CYP80B1
13
0.23%
LAMT
11
0.19%
MPO
11
0.19%
FPPS
11
0.19%
HPPR
10
0.17%
CNMT
9
0.16%
CYP719
9
0.16%
AACT
9
0.16%
TYDC_DDC
8
0.14%
SQE
8
0.14%
DXS
8
0.14%
SQS/FDFT1
7
0.12%
GGPPS
7
0.12%
MVK
7
0.12%
6OMT_4OMT_SOMT
6
0.1%
ISY
6
0.1%
FLS
6
0.1%
XMT_MXMT_DXMT
5
0.09%
CHI
5
0.09%
DET2
5
0.09%
ADC
4
0.07%
TDC
4
0.07%
IDI
4
0.07%
HMGR
4
0.07%
CYP80F1
3
0.05%
FK
3
0.05%
DWF1
3
0.05%
SMO1/SMO2
3
0.05%
MVD
3
0.05%
MCT/IspD
3
0.05%
HMGS
3
0.05%
PMK
3
0.05%
HYD1
2
0.03%
DWF5
2
0.03%
CMK/IspE
2
0.03%
DXR
2
0.03%
MDS/IspF
2
0.03%
GPPS
2
0.03%
DWF7
1
0.02%
CPI1
1
0.02%
HDR/IspH
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 744 | 21 | BAHD (264) | View species results |
| Alkaloid pathway | 602 | 23 | GES (97) | View species results |
| Phenylpropanoid pathway | 494 | 11 | POD (187) | View species results |
| Flavonoid pathway | 307 | 13 | UFGT (195) | View species results |
| Rosmarinic acid pathway | 183 | 7 | C4H (90) | View species results |
| Steroid pathway | 126 | 13 | CAS (56) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1947 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 397 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| DlotDlo_alt0129F-001-01.10054380.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt0132F-001-01.10055320.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_alt0138F-010-01.10057430.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_alt0141F-010-01.10057980.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt0190F-001-01.10067940.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt0190F-001-01.10067950.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt0190F-001-01.10067970.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_alt0331F-003-01.10085570.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_alt0429F-005-01.10093970.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt0437F-003-01.10094180.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt0450F-002-01.10095230.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt0450F-002-01.10095240.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt0565F-003-01.10100740.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt0565F-003-01.10100750.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt0565F-003-01.10100760.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt0565F-003-01.10100770.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt0565F-004-01.10100800.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt1077F-001-01.10109770.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_alt1077F-002-01.10109780.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0000F.10114820.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0000F.10116060.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0000F.10116070.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0000F.10116080.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0001F.10120750.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_pri0001F.10120770.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_pri0001F.10120800.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0001F.10122690.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0001F.10122700.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0001F.10122720.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0008F.10140100.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0016F.10151460.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0016F.10151470.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_pri0016F.10151480.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0016F.10151500.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0017F.10155730.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0023F.10162630.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0023F.10162640.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_pri0024F.10165900.1 | Alkaloid | 7DLGT | high | pass |
| DlotDlo_pri0024F.10165910.1 | Alkaloid | 7DLGT | high | pass |
| DlotDlo_pri0024F.10165920.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_pri0024F.10165930.1 | Alkaloid | 7DLGT | high | pass |
| DlotDlo_pri0024F.10165940.1 | Alkaloid | 7DLGT | high | pass |
| DlotDlo_pri0024F.10166070.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_pri0028F.10173550.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0029F.10175140.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0030F.10176910.1 | Alkaloid | 7DLGT | low | borderline |
| DlotDlo_pri0031F.10179630.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_pri0031F.10179650.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_pri0031F.10179680.1 | Alkaloid | 7DLGT | medium | pass |
| DlotDlo_pri0031F.10179710.1 | Alkaloid | 7DLGT | medium | pass |