PlantSME Plant secondary metabolism enzyme database

Durio zibethinus (durio_zibethinus)

Imported from atlas release summary for Durio zibethinus.

2530
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.33% Alkaloid pathway 23.91% Phenylpropanoid pathway 21.42% Flavonoid pathway 9.88% Rosmarinic acid pathway 8.06% Steroid pathway 7.39%
Family Distribution
BAHD 7.57% C4H 5.59% C3'H/CYP98A 5.26% 4CL 5.12% NMT 4.92% POD 4.32% F3H 3.56% IFS 3.43%
Other Families 60.24%
More Families (97)
CYP76 190 3.09% T3O 180 2.92% UGT 162 2.63% UFGT 154 2.5% 7DLGT 152 2.47% DWF4/CYP90B1 152 2.47% STR 135 2.19% CODM/T6ODM 117 1.9% SMT1/SMT2/SMT3 101 1.64% CYP71 92 1.49% CAS 91 1.48% CAD 90 1.46% F3'H/CYP75B 89 1.45% BR6OX2/CYP85A2 83 1.35% TRI/TRII 77 1.25% IFR 72 1.17% CYP90D1 63 1.02% H6H 62 1.01% LAC 60 0.97% NCS 58 0.94% HCT 57 0.93% GS 56 0.91% BBE 52 0.84% ANR 49 0.8% 7DLH 48 0.78% CSE 47 0.76% CCR 47 0.76% GES 46 0.75% PYKS 46 0.75% TPS 46 0.75% PMT 43 0.7% SGD 43 0.7% RAS 42 0.68% FNS 40 0.65% SLS 39 0.63% T16H 39 0.63% TAT 37 0.6% IO 36 0.58% COR 33 0.54% COMT 32 0.52% CPR 29 0.47% F5H/CYP84A 27 0.44% 16OMT 25 0.41% G8O/G8H 25 0.41% CNMT 24 0.39% PAL 24 0.39% BR6OX1/CYP85A1 23 0.37% AACT 23 0.37% F3'5'H/CYP75A 22 0.36% GGPPS 22 0.36% ISY 21 0.34% LAMT 19 0.31% 8HGO 19 0.31% CYP51G1 19 0.31% CPD/CYP90A1 18 0.29% MPO 17 0.28% CCoAOMT 17 0.28% FPPS 17 0.28% DXS 16 0.26% TYDC_DDC 15 0.24% SQS/FDFT1 15 0.24% ROT3/CYP90C1 15 0.24% DFR 14 0.23% SQE 13 0.21% ANS/LDOX 9 0.15% DWF5 9 0.15% SMO1/SMO2 9 0.15% CYP719 8 0.13% CHS 8 0.13% DET2 8 0.13% MVD 8 0.13% PMK 8 0.13% CYP80B1 7 0.11% HDS/IspG 7 0.11% HMGS 7 0.11% CYP80F1 6 0.1% TDC 6 0.1% HPPR 6 0.1% DXR 6 0.1% FLS 5 0.08% FK 5 0.08% MVK 5 0.08% CMK/IspE 5 0.08% ODC 4 0.06% MDS/IspF 4 0.06% HMGR 4 0.06% MCT/IspD 4 0.06% ADC 3 0.05% CHI 3 0.05% HYD1 3 0.05% DWF1 3 0.05% DWF7 3 0.05% XMT_MXMT_DXMT 2 0.03% IDI 2 0.03% GPPS 2 0.03% HDR/IspH 2 0.03% CPI1 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 742 20 BAHD (388) View species results
Alkaloid pathway 605 22 NMT (177) View species results
Phenylpropanoid pathway 542 12 POD (260) View species results
Flavonoid pathway 250 10 UFGT (146) View species results
Rosmarinic acid pathway 204 7 C4H (79) View species results
Steroid pathway 187 12 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2060 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 565 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
XP_022767570.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
XP_022767634.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
XP_022769184.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
XP_022769741.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
XP_022772389.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
XP_022772391.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
XP_022772485.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
XP_022773464.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
XP_022773731.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
XP_022774143.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH