PlantSME Plant secondary metabolism enzyme database

Eremochloa ophiuroides (eremochloa_ophiuroides)

Imported from atlas release summary for Eremochloa ophiuroides.

2381
Candidate Protein Records
2175
Pathway-Level Records
5442
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 30.34% Alkaloid pathway 22.57% Phenylpropanoid pathway 18.34% Flavonoid pathway 15.17% Rosmarinic acid pathway 9.15% Steroid pathway 4.41%
Family Distribution
C4H 6.76% C3'H/CYP98A 6.52% UGT 5.42% BAHD 4.98% 7DLGT 4.96% UFGT 4.67% CYP76 3.93% T3O 3.79%
Other Families 58.97%
More Families (97)
POD 193 3.55% IFS 178 3.27% F3'H/CYP75B 165 3.03% 4CL 153 2.81% BR6OX2/CYP85A2 139 2.55% DWF4/CYP90B1 124 2.28% F3H 97 1.78% CYP71 97 1.78% NMT 95 1.75% STR 75 1.38% TPS 73 1.34% GES 70 1.29% HCT 69 1.27% CAD 67 1.23% COMT 64 1.18% PMT 61 1.12% RAS 59 1.08% SMT1/SMT2/SMT3 59 1.08% G8O/G8H 58 1.07% CAS 58 1.07% 16OMT 54 0.99% TRI/TRII 54 0.99% SLS 50 0.92% CSE 49 0.9% H6H 46 0.85% CODM/T6ODM 44 0.81% T16H 44 0.81% SGD 43 0.79% FNS 42 0.77% CYP90D1 40 0.74% PYKS 39 0.72% NCS 38 0.7% ANR 37 0.68% CYP51G1 36 0.66% IFR 35 0.64% COR 31 0.57% LAC 31 0.57% CCR 31 0.57% IO 29 0.53% F3'5'H/CYP75A 29 0.53% F5H/CYP84A 28 0.51% GS 22 0.4% CPD/CYP90A1 22 0.4% PAL 21 0.39% BR6OX1/CYP85A1 21 0.39% CHS 19 0.35% 8HGO 18 0.33% DFR 18 0.33% ANS/LDOX 18 0.33% BBE 17 0.31% CNMT 15 0.28% TAT 14 0.26% CYP719 13 0.24% XMT_MXMT_DXMT 12 0.22% FPPS 11 0.2% CCoAOMT 10 0.18% HPPR 10 0.18% CYP80B1 9 0.17% CPR 9 0.17% 7DLH 8 0.15% TYDC_DDC 8 0.15% DET2 8 0.15% AACT 8 0.15% GGPPS 8 0.15% ISY 7 0.13% LAMT 7 0.13% SMO1/SMO2 7 0.13% SQS/FDFT1 7 0.13% HMGS 7 0.13% MPO 6 0.11% ODC 5 0.09% TDC 5 0.09% ROT3/CYP90C1 5 0.09% CYP80F1 4 0.07% DWF1 4 0.07% MCT/IspD 4 0.07% HMGR 4 0.07% MVK 4 0.07% DXS 4 0.07% CHI 3 0.06% HYD1 3 0.06% ADC 2 0.04% CMK/IspE 2 0.04% IDI 2 0.04% MVD 2 0.04% 6OMT_4OMT_SOMT 1 0.02% FLS 1 0.02% DWF7 1 0.02% SQE 1 0.02% FK 1 0.02% CPI1 1 0.02% DWF5 1 0.02% DXR 1 0.02% HDR/IspH 1 0.02% PMK 1 0.02% HDS/IspG 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 660 19 UGT (267) View species results
Alkaloid pathway 491 24 7DLGT (104) View species results
Phenylpropanoid pathway 399 11 POD (180) View species results
Flavonoid pathway 330 13 UFGT (239) View species results
Rosmarinic acid pathway 199 7 C4H (103) View species results
Steroid pathway 96 13 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2242 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 399 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
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Protein/Isoform Record Pathway Family Confidence Status
EophSS_3160011800.1 Alkaloid T3O medium pass
EophSS_4920014950.1 Alkaloid T3O medium borderline
EophSS_50015330.1 Alkaloid T3O medium borderline
EophSS_50015570.1 Alkaloid T3O medium borderline
EophSS_54_F_10016610.1 Alkaloid T3O medium pass
EophSS_54_F_2_D0016690.1 Alkaloid T3O medium borderline