PlantSME Plant secondary metabolism enzyme database

Eriobotrya japonica (eriobotrya_japonica)

Imported from atlas release summary for Eriobotrya japonica.

2387
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.7% Alkaloid pathway 22.87% Phenylpropanoid pathway 20.44% Flavonoid pathway 13.32% Rosmarinic acid pathway 8.17% Steroid pathway 5.49%
Family Distribution
C3'H/CYP98A 6.03% C4H 5.83% BAHD 5.57% UGT 4.36% 7DLGT 4.14% UFGT 3.97% IFS 3.81% CYP76 3.64%
Other Families 62.65%
More Families (97)
POD 210 3.59% T3O 191 3.26% 4CL 189 3.23% F3H 187 3.2% DWF4/CYP90B1 132 2.26% BR6OX2/CYP85A2 112 1.91% CAD 109 1.86% NMT 106 1.81% F3'H/CYP75B 106 1.81% H6H 102 1.74% CODM/T6ODM 99 1.69% STR 90 1.54% CAS 81 1.38% LAC 73 1.25% GS 72 1.23% CYP71 72 1.23% CYP90D1 66 1.13% TPS 64 1.09% TRI/TRII 61 1.04% HCT 59 1.01% SGD 58 0.99% GES 58 0.99% TAT 57 0.97% SMT1/SMT2/SMT3 57 0.97% CSE 55 0.94% COMT 55 0.94% IFR 53 0.91% PYKS 51 0.87% IO 49 0.84% PMT 45 0.77% SLS 44 0.75% 7DLH 43 0.74% T16H 41 0.7% ANR 41 0.7% RAS 40 0.68% NCS 39 0.67% 16OMT 37 0.63% LAMT 35 0.6% F5H/CYP84A 33 0.56% BR6OX1/CYP85A1 33 0.56% F3'5'H/CYP75A 31 0.53% FNS 31 0.53% BBE 30 0.51% COR 29 0.5% CCR 27 0.46% G8O/G8H 24 0.41% ROT3/CYP90C1 19 0.32% 8HGO 18 0.31% ISY 18 0.31% SQE 18 0.31% CPD/CYP90A1 18 0.31% CHS 16 0.27% ANS/LDOX 15 0.26% PAL 15 0.26% CYP51G1 15 0.26% DFR 14 0.24% GGPPS 12 0.21% CNMT 11 0.19% CHI 11 0.19% CCoAOMT 11 0.19% SQS/FDFT1 11 0.19% AACT 11 0.19% FPPS 10 0.17% CPR 9 0.15% MPO 8 0.14% CYP80B1 8 0.14% CYP719 7 0.12% XMT_MXMT_DXMT 7 0.12% HPPR 7 0.12% DET2 7 0.12% MVK 6 0.1% DXS 6 0.1% MVD 6 0.1% TDC 5 0.09% TYDC_DDC 5 0.09% HYD1 5 0.09% SMO1/SMO2 5 0.09% HMGR 5 0.09% HMGS 5 0.09% CYP80F1 4 0.07% MCT/IspD 4 0.07% 6OMT_4OMT_SOMT 3 0.05% ADC 3 0.05% CPI1 3 0.05% HDR/IspH 3 0.05% MDS/IspF 3 0.05% FLS 2 0.03% FK 2 0.03% DWF1 2 0.03% DWF5 2 0.03% DWF7 2 0.03% DXR 2 0.03% CMK/IspE 2 0.03% HDS/IspG 2 0.03% PMK 2 0.03% IDI 2 0.03% ODC 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 709 19 BAHD (255) View species results
Alkaloid pathway 546 24 7DLGT (112) View species results
Phenylpropanoid pathway 488 11 POD (199) View species results
Flavonoid pathway 318 10 UFGT (210) View species results
Rosmarinic acid pathway 195 7 C4H (78) View species results
Steroid pathway 131 12 CAS (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2178 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 425 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
EjapContig002390015370.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
EjapContig002390015380.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
EjapContig00342_ERROPOS496585_10018270.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
EjapContig003800019520.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
EjapContig003800019530.1 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
EjapContig003800019540.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
EjapContig003800019550.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
EjapContig005640024780.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE