PlantSME Plant secondary metabolism enzyme database

Erysimum cheiranthoides (erysimum_cheiranthoides)

Imported from atlas release summary for Erysimum cheiranthoides.

1094
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.17% Alkaloid pathway 23.13% Phenylpropanoid pathway 20.75% Flavonoid pathway 12.8% Steroid pathway 6.12% Rosmarinic acid pathway 6.03%
Family Distribution
BAHD 6.6% C4H 5.96% C3'H/CYP98A 5.26% POD 4.23% 4CL 3.94% CYP76 3.85% UGT 3.56% UFGT 3.27%
Other Families 63.32%
More Families (95)
7DLGT 99 3.17% F3H 97 3.11% NMT 85 2.73% IFS 85 2.73% T3O 72 2.31% CODM/T6ODM 70 2.24% DWF4/CYP90B1 70 2.24% F3'H/CYP75B 69 2.21% BR6OX2/CYP85A2 60 1.92% SGD 59 1.89% STR 58 1.86% SMT1/SMT2/SMT3 55 1.76% H6H 45 1.44% CSE 43 1.38% T16H 42 1.35% FNS 39 1.25% CYP71 38 1.22% CAS 37 1.19% IFR 36 1.15% TRI/TRII 35 1.12% F5H/CYP84A 34 1.09% TAT 29 0.93% PYKS 28 0.9% CAD 28 0.9% TPS 27 0.87% G8O/G8H 26 0.83% LAMT 25 0.8% RAS 25 0.8% SLS 24 0.77% LAC 24 0.77% CYP90D1 24 0.77% GES 22 0.71% IO 20 0.64% HCT 20 0.64% GS 19 0.61% ANR 18 0.58% CCR 17 0.55% COMT 16 0.51% CPD/CYP90A1 16 0.51% BBE 15 0.48% F3'5'H/CYP75A 15 0.48% ANS/LDOX 15 0.48% NCS 14 0.45% 7DLH 14 0.45% 8HGO 13 0.42% GGPPS 13 0.42% PAL 12 0.38% BR6OX1/CYP85A1 12 0.38% PMT 11 0.35% ROT3/CYP90C1 11 0.35% CYP51G1 10 0.32% CYP719 9 0.29% MPO 9 0.29% CPR 9 0.29% FPPS 9 0.29% CNMT 8 0.26% 16OMT 8 0.26% COR 8 0.26% DFR 8 0.26% DXS 8 0.26% AACT 7 0.22% CHI 6 0.19% CCoAOMT 6 0.19% SQS/FDFT1 6 0.19% MVD 6 0.19% CYP80F1 5 0.16% SQE 5 0.16% XMT_MXMT_DXMT 4 0.13% TDC 4 0.13% ISY 4 0.13% CHS 4 0.13% SMO1/SMO2 4 0.13% MVK 4 0.13% FLS 3 0.1% DET2 3 0.1% DWF7 3 0.1% MCT/IspD 3 0.1% CMK/IspE 3 0.1% MDS/IspF 3 0.1% DXR 3 0.1% TYDC_DDC 2 0.06% ADC 2 0.06% CYP80B1 2 0.06% HPPR 2 0.06% HYD1 2 0.06% IDI 2 0.06% HMGR 2 0.06% DWF5 1 0.03% DWF1 1 0.03% CPI1 1 0.03% FK 1 0.03% PMK 1 0.03% HDR/IspH 1 0.03% HMGS 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 341 19 BAHD (147) View species results
Alkaloid pathway 253 20 NMT (45) View species results
Phenylpropanoid pathway 227 11 POD (115) View species results
Flavonoid pathway 140 8 UFGT (97) View species results
Steroid pathway 67 12 CAS (27) View species results
Rosmarinic acid pathway 66 7 4CL (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1128 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 251 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Gene Pathway Family Confidence Status Best Target
erysimum_cheiranthoides_Erche08g011650.1.mRNA1.mrna1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
erysimum_cheiranthoides_Erche08g018480.1.mRNA1.mrna1 Alkaloid STR low borderline STR__00003__sp_Q9M1B4_SSL13_ARATH
erysimum_cheiranthoides_Erche08g019380.1.mRNA1.mrna1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
erysimum_cheiranthoides_Erche08g020630.1.mRNA1.mrna1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
erysimum_cheiranthoides_Erche08g020690.1.mRNA1.mrna1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
erysimum_cheiranthoides_Erche08g022490.1.mRNA1.mrna1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
erysimum_cheiranthoides_Erche08g024590.1.mRNA1.mrna1 Alkaloid STR low borderline STR__00003__sp_Q9M1B4_SSL13_ARATH
erysimum_cheiranthoides_Erche08g030330.1.mRNA1.mrna1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH