Fagopyrum esculentum (fagopyrum_esculentum)
Imported from atlas release summary for Fagopyrum esculentum.
2047
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2047
Candidate Genes
C4H
6.65%
C3'H/CYP98A
6.34%
BAHD
5.0%
CYP76
4.75%
UGT
4.68%
IFS
4.4%
UFGT
4.35%
7DLGT
4.27%
Other Families
59.56%
More Families (96)
T3O
200
3.86%
POD
191
3.69%
4CL
129
2.49%
F3H
126
2.43%
DWF4/CYP90B1
121
2.34%
BR6OX2/CYP85A2
108
2.09%
NMT
95
1.84%
CAD
94
1.82%
F3'H/CYP75B
93
1.8%
CODM/T6ODM
88
1.7%
STR
83
1.6%
TPS
64
1.24%
GES
61
1.18%
SMT1/SMT2/SMT3
59
1.14%
COMT
58
1.12%
PYKS
57
1.1%
CAS
56
1.08%
H6H
54
1.04%
G8O/G8H
53
1.02%
CYP90D1
53
1.02%
CYP71
53
1.02%
T16H
52
1.0%
HCT
51
0.99%
RAS
51
0.99%
LAC
42
0.81%
16OMT
39
0.75%
ANR
39
0.75%
PAL
39
0.75%
TRI/TRII
38
0.73%
CSE
38
0.73%
CPD/CYP90A1
37
0.71%
F3'5'H/CYP75A
33
0.64%
TAT
33
0.64%
IFR
32
0.62%
F5H/CYP84A
32
0.62%
SGD
31
0.6%
GS
31
0.6%
COR
30
0.58%
IO
29
0.56%
CCR
27
0.52%
8HGO
25
0.48%
CHS
25
0.48%
PMT
23
0.44%
7DLH
22
0.43%
BBE
18
0.35%
SLS
18
0.35%
BR6OX1/CYP85A1
18
0.35%
CYP51G1
17
0.33%
ANS/LDOX
16
0.31%
FPPS
16
0.31%
NCS
15
0.29%
FNS
15
0.29%
SQS/FDFT1
15
0.29%
LAMT
13
0.25%
CNMT
12
0.23%
ROT3/CYP90C1
12
0.23%
DFR
11
0.21%
XMT_MXMT_DXMT
10
0.19%
ODC
10
0.19%
CYP719
10
0.19%
CPR
10
0.19%
MPO
9
0.17%
HPPR
9
0.17%
ISY
8
0.15%
MVK
8
0.15%
TYDC_DDC
7
0.14%
CCoAOMT
7
0.14%
SMO1/SMO2
7
0.14%
HMGR
7
0.14%
IDI
7
0.14%
6OMT_4OMT_SOMT
6
0.12%
TDC
6
0.12%
AACT
6
0.12%
GGPPS
6
0.12%
MVD
6
0.12%
CHI
5
0.1%
SQE
5
0.1%
ADC
4
0.08%
CYP80B1
4
0.08%
FLS
4
0.08%
DXS
4
0.08%
CYP80F1
3
0.06%
DWF5
3
0.06%
DET2
3
0.06%
HYD1
3
0.06%
DWF1
2
0.04%
FK
2
0.04%
DXR
2
0.04%
HMGS
2
0.04%
CPI1
1
0.02%
DWF7
1
0.02%
MDS/IspF
1
0.02%
HDR/IspH
1
0.02%
CMK/IspE
1
0.02%
HDS/IspG
1
0.02%
MCT/IspD
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 598 | 18 | UGT (209) | View species results |
| Alkaloid pathway | 452 | 21 | 7DLGT (108) | View species results |
| Phenylpropanoid pathway | 408 | 12 | POD (183) | View species results |
| Flavonoid pathway | 291 | 11 | UFGT (203) | View species results |
| Rosmarinic acid pathway | 204 | 7 | C4H (115) | View species results |
| Steroid pathway | 94 | 13 | CAS (33) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2114 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 361 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| fagopyrum_esculentum_FesPL4_sc0160.1.g000310.1 | Terpenoid | TPS | medium | pass | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| fagopyrum_esculentum_FesPL4_sc0160.1.g000320.1 | Terpenoid | TPS | medium | pass | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| fagopyrum_esculentum_FesPL4_sc0180.1.g000870.1 | Terpenoid | TPS | medium | pass | TPS__00008__sp_A0A167V661_TPS8_CAMSI |
| fagopyrum_esculentum_FesPL4_sc0180.1.g000880.1 | Terpenoid | TPS | medium | pass | TPS__00008__sp_A0A167V661_TPS8_CAMSI |
| fagopyrum_esculentum_FesPL4_sc0180.1.g000890.1 | Terpenoid | TPS | medium | pass | TPS__00008__sp_A0A167V661_TPS8_CAMSI |
| fagopyrum_esculentum_FesPL4_sc0180.1.g000900.1 | Terpenoid | TPS | medium | pass | TPS__00008__sp_A0A167V661_TPS8_CAMSI |
| fagopyrum_esculentum_FesPL4_sc0308.1.g000030.1 | Terpenoid | TPS | medium | pass | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| fagopyrum_esculentum_FesPL4_sc0389.1.g000060.1 | Terpenoid | TPS | medium | pass | TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF |
| fagopyrum_esculentum_FesPL4_sc0415.1.g001150.1 | Terpenoid | TPS | medium | pass | TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF |
| fagopyrum_esculentum_FesPL4_sc0415.1.g001210.1 | Terpenoid | TPS | medium | pass | TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF |
| fagopyrum_esculentum_FesPL4_sc0451.1.g000140.1 | Terpenoid | TPS | medium | pass | TPS__00008__sp_A0A167V661_TPS8_CAMSI |
| fagopyrum_esculentum_FesPL4_sc0483.1.g000270.1 | Terpenoid | TPS | medium | pass | TPS__00001__sp_A0A0D4D912_TPS3_XANST |
| fagopyrum_esculentum_FesPL4_sc0544.1.g000250.1 | Terpenoid | TPS | medium | pass | TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA |
| fagopyrum_esculentum_FesPL4_sc0544.1.g000280.1 | Terpenoid | TPS | medium | pass | TPS__00129__sp_J7LP58_TPS1_PHYDL |