PlantSME Plant secondary metabolism enzyme database

Fragaria x ananassa (fragaria_x_ananassa)

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Imported from atlas release summary for Fragaria x ananassa.

4449
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1368 19 BAHD (493) View species results
Alkaloid pathway 955 28 7DLGT (188) View species results
Phenylpropanoid pathway 894 13 POD (312) View species results
Flavonoid pathway 594 15 UFGT (394) View species results
Rosmarinic acid pathway 355 7 C4H (138) View species results
Steroid pathway 283 14 CAS (124) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4757 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 824 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status Best Target
fragaria_x_ananassa_maker-Fvb6-3-augustus-gene-20.31-mRNA-1 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
fragaria_x_ananassa_maker-Fvb6-4-augustus-gene-216.35-mRNA-1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
fragaria_x_ananassa_maker-Fvb6-4-snap-gene-326.67-mRNA-1 Phenylpropanoid CCR low borderline CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
fragaria_x_ananassa_maker-Fvb6-4-snap-gene-6.48-mRNA-1 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
fragaria_x_ananassa_maker-Fvb7-1-augustus-gene-107.36-mRNA-1 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
fragaria_x_ananassa_maker-Fvb7-1-augustus-gene-107.37-mRNA-1 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
fragaria_x_ananassa_maker-Fvb7-1-augustus-gene-154.34-mRNA-1 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
fragaria_x_ananassa_maker-Fvb7-1-augustus-gene-154.35-mRNA-1 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
fragaria_x_ananassa_maker-Fvb7-1-augustus-gene-198.29-mRNA-1 Phenylpropanoid CCR low borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
fragaria_x_ananassa_maker-Fvb7-1-snap-gene-185.54-mRNA-1 Phenylpropanoid CCR low borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
fragaria_x_ananassa_maker-Fvb7-1-snap-gene-198.44-mRNA-1 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
fragaria_x_ananassa_maker-Fvb7-2-augustus-gene-127.24-mRNA-1 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
fragaria_x_ananassa_maker-Fvb7-2-augustus-gene-163.42-mRNA-1 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
fragaria_x_ananassa_maker-Fvb7-2-snap-gene-101.53-mRNA-1 Phenylpropanoid CCR low borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
fragaria_x_ananassa_maker-Fvb7-2-snap-gene-163.54-mRNA-1 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
fragaria_x_ananassa_maker-Fvb7-2-snap-gene-192.42-mRNA-1 Phenylpropanoid CCR low borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
fragaria_x_ananassa_maker-Fvb7-4-snap-gene-132.56-mRNA-1 Phenylpropanoid CCR low borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
fragaria_x_ananassa_snap_masked-Fvb5-1-processed-gene-29.22-mRNA-1 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
fragaria_x_ananassa_snap_masked-Fvb7-2-processed-gene-127.15-mRNA-1 Phenylpropanoid CCR low borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
fragaria_x_ananassa_snap_masked-Fvb7-4-processed-gene-101.24-mRNA-1 Phenylpropanoid CCR low borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY