PlantSME Plant secondary metabolism enzyme database

Fragaria x ananassa (fragaria_x_ananassa)

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Imported from atlas release summary for Fragaria x ananassa.

4449
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1368 19 BAHD (493) View species results
Alkaloid pathway 955 28 7DLGT (188) View species results
Phenylpropanoid pathway 894 13 POD (312) View species results
Flavonoid pathway 594 15 UFGT (394) View species results
Rosmarinic acid pathway 355 7 C4H (138) View species results
Steroid pathway 283 14 CAS (124) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4757 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 824 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
fragaria_x_ananassa_maker-Fvb1-2-augustus-gene-92.35-mRNA-1 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
fragaria_x_ananassa_maker-Fvb1-2-snap-gene-162.27-mRNA-1 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
fragaria_x_ananassa_maker-Fvb1-2-snap-gene-201.50-mRNA-1 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
fragaria_x_ananassa_maker-Fvb1-2-snap-gene-230.39-mRNA-1 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
fragaria_x_ananassa_maker-Fvb1-2-snap-gene-52.86-mRNA-1 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
fragaria_x_ananassa_maker-Fvb1-3-augustus-gene-18.38-mRNA-1 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
fragaria_x_ananassa_maker-Fvb1-3-augustus-gene-2.48-mRNA-1 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
fragaria_x_ananassa_maker-Fvb1-3-augustus-gene-82.36-mRNA-1 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
fragaria_x_ananassa_maker-Fvb1-3-augustus-gene-91.37-mRNA-1 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
fragaria_x_ananassa_maker-Fvb1-3-snap-gene-22.65-mRNA-1 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
fragaria_x_ananassa_maker-Fvb1-4-augustus-gene-11.53-mRNA-1 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
fragaria_x_ananassa_maker-Fvb1-4-augustus-gene-142.23-mRNA-1 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
fragaria_x_ananassa_maker-Fvb1-4-augustus-gene-186.20-mRNA-1 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
fragaria_x_ananassa_maker-Fvb1-4-augustus-gene-70.34-mRNA-1 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
fragaria_x_ananassa_maker-Fvb1-4-augustus-gene-82.34-mRNA-1 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
fragaria_x_ananassa_maker-Fvb1-4-snap-gene-55.66-mRNA-1 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
fragaria_x_ananassa_maker-Fvb2-1-augustus-gene-134.45-mRNA-1 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
fragaria_x_ananassa_maker-Fvb2-1-augustus-gene-188.48-mRNA-1 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
fragaria_x_ananassa_maker-Fvb2-1-snap-gene-202.54-mRNA-1 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
fragaria_x_ananassa_maker-Fvb2-1-snap-gene-255.58-mRNA-1 Alkaloid NMT medium borderline NMT__00058__sp_Q9FZN8_TCS1_CAMSI
fragaria_x_ananassa_maker-Fvb2-1-snap-gene-7.47-mRNA-1 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
fragaria_x_ananassa_maker-Fvb2-2-augustus-gene-219.48-mRNA-1 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
fragaria_x_ananassa_maker-Fvb2-2-augustus-gene-34.40-mRNA-1 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
fragaria_x_ananassa_maker-Fvb2-2-augustus-gene-34.45-mRNA-1 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
fragaria_x_ananassa_maker-Fvb2-2-augustus-gene-74.59-mRNA-1 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
fragaria_x_ananassa_maker-Fvb2-2-snap-gene-183.48-mRNA-1 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
fragaria_x_ananassa_maker-Fvb2-2-snap-gene-31.62-mRNA-1 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
fragaria_x_ananassa_maker-Fvb2-3-augustus-gene-113.51-mRNA-1 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
fragaria_x_ananassa_maker-Fvb2-3-augustus-gene-210.29-mRNA-1 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
fragaria_x_ananassa_maker-Fvb2-3-augustus-gene-7.52-mRNA-1 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
fragaria_x_ananassa_maker-Fvb2-3-augustus-gene-74.33-mRNA-1 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
fragaria_x_ananassa_maker-Fvb2-3-augustus-gene-8.40-mRNA-1 Alkaloid NMT low borderline NMT__00055__sp_Q9FNC7_SUVR2_ARATH
fragaria_x_ananassa_maker-Fvb2-3-snap-gene-33.59-mRNA-1 Alkaloid NMT medium borderline NMT__00058__sp_Q9FZN8_TCS1_CAMSI
fragaria_x_ananassa_maker-Fvb2-3-snap-gene-76.56-mRNA-1 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
fragaria_x_ananassa_maker-Fvb2-4-augustus-gene-200.55-mRNA-1 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
fragaria_x_ananassa_maker-Fvb2-4-augustus-gene-218.41-mRNA-1 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
fragaria_x_ananassa_maker-Fvb2-4-snap-gene-157.66-mRNA-1 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
fragaria_x_ananassa_maker-Fvb3-1-augustus-gene-100.38-mRNA-1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
fragaria_x_ananassa_maker-Fvb3-1-augustus-gene-109.25-mRNA-1 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
fragaria_x_ananassa_maker-Fvb3-1-augustus-gene-219.40-mRNA-1 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
fragaria_x_ananassa_maker-Fvb3-1-augustus-gene-261.39-mRNA-1 Alkaloid NMT low borderline NMT__00045__sp_Q8VYX1_PEAM1_WHEAT
fragaria_x_ananassa_maker-Fvb3-1-augustus-gene-291.43-mRNA-1 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
fragaria_x_ananassa_maker-Fvb3-1-snap-gene-248.37-mRNA-1 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
fragaria_x_ananassa_maker-Fvb3-1-snap-gene-94.31-mRNA-1 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
fragaria_x_ananassa_maker-Fvb3-2-augustus-gene-215.23-mRNA-1 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
fragaria_x_ananassa_maker-Fvb3-2-augustus-gene-220.37-mRNA-1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
fragaria_x_ananassa_maker-Fvb3-2-augustus-gene-58.58-mRNA-1 Alkaloid NMT low borderline NMT__00045__sp_Q8VYX1_PEAM1_WHEAT
fragaria_x_ananassa_maker-Fvb3-2-augustus-gene-70.42-mRNA-1 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
fragaria_x_ananassa_maker-Fvb3-2-augustus-gene-98.54-mRNA-1 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
fragaria_x_ananassa_maker-Fvb3-2-snap-gene-70.56-mRNA-1 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI