Fragaria x ananassa (fragaria_x_ananassa)
/
Imported from atlas release summary for Fragaria x ananassa.
5621
Candidate Protein Records
4449
Pathway-Level Records
11815
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
11815
Family-Level Calls
C4H
6.87%
C3'H/CYP98A
5.98%
BAHD
5.49%
UGT
4.29%
IFS
4.06%
CYP76
3.94%
7DLGT
3.8%
UFGT
3.77%
Other Families
61.79%
More Families (97)
4CL
405
3.43%
POD
386
3.27%
T3O
330
2.79%
F3H
313
2.65%
DWF4/CYP90B1
272
2.3%
NMT
266
2.25%
F3'H/CYP75B
246
2.08%
BR6OX2/CYP85A2
245
2.07%
STR
212
1.79%
H6H
184
1.56%
CAD
179
1.52%
CODM/T6ODM
177
1.5%
LAC
176
1.49%
CAS
152
1.29%
CYP90D1
147
1.24%
TPS
136
1.15%
CSE
134
1.13%
SMT1/SMT2/SMT3
125
1.06%
T16H
123
1.04%
G8O/G8H
121
1.02%
GES
120
1.02%
CYP71
117
0.99%
SLS
113
0.96%
7DLH
113
0.96%
TRI/TRII
109
0.92%
HCT
106
0.9%
GS
100
0.85%
TAT
99
0.84%
IO
97
0.82%
FNS
95
0.8%
IFR
90
0.76%
F3'5'H/CYP75A
84
0.71%
PYKS
79
0.67%
PMT
78
0.66%
F5H/CYP84A
78
0.66%
COMT
78
0.66%
ANR
72
0.61%
CCR
70
0.59%
SGD
69
0.58%
RAS
69
0.58%
BR6OX1/CYP85A1
58
0.49%
BBE
53
0.45%
COR
51
0.43%
NCS
51
0.43%
DFR
50
0.42%
SQE
47
0.4%
CPD/CYP90A1
40
0.34%
LAMT
39
0.33%
16OMT
39
0.33%
CCoAOMT
39
0.33%
ROT3/CYP90C1
39
0.33%
8HGO
33
0.28%
ANS/LDOX
32
0.27%
PAL
30
0.25%
AACT
30
0.25%
CYP51G1
28
0.24%
MPO
27
0.23%
HMGR
27
0.23%
CYP719
26
0.22%
CNMT
26
0.22%
FPPS
23
0.19%
CPR
22
0.19%
CHS
20
0.17%
MVK
20
0.17%
HPPR
18
0.15%
DET2
18
0.15%
GGPPS
18
0.15%
ISY
17
0.14%
SQS/FDFT1
17
0.14%
SMO1/SMO2
17
0.14%
CYP80B1
16
0.14%
DXS
15
0.13%
MVD
12
0.1%
CHI
10
0.08%
MCT/IspD
9
0.08%
6OMT_4OMT_SOMT
8
0.07%
PMK
8
0.07%
TDC
7
0.06%
XMT_MXMT_DXMT
7
0.06%
CMK/IspE
7
0.06%
HDR/IspH
7
0.06%
IDI
7
0.06%
DXR
7
0.06%
ADC
6
0.05%
TYDC_DDC
6
0.05%
HYD1
6
0.05%
FK
6
0.05%
ODC
5
0.04%
HMGS
5
0.04%
FLS
4
0.03%
DWF7
4
0.03%
DWF5
4
0.03%
HDS/IspG
4
0.03%
MDS/IspF
4
0.03%
DWF1
3
0.03%
CPI1
3
0.03%
GPPS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1368 | 19 | BAHD (493) | View species results |
| Alkaloid pathway | 955 | 28 | 7DLGT (188) | View species results |
| Phenylpropanoid pathway | 894 | 13 | POD (312) | View species results |
| Flavonoid pathway | 594 | 15 | UFGT (394) | View species results |
| Rosmarinic acid pathway | 355 | 7 | C4H (138) | View species results |
| Steroid pathway | 283 | 14 | CAS (124) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 4757 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 824 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| fragaria_x_ananassa_snap_masked-Fvb2-1-processed-gene-184.29-mRNA-1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| fragaria_x_ananassa_snap_masked-Fvb2-2-processed-gene-52.41-mRNA-1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| fragaria_x_ananassa_snap_masked-Fvb3-2-processed-gene-70.29-mRNA-1 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| fragaria_x_ananassa_snap_masked-Fvb3-3-processed-gene-12.18-mRNA-1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| fragaria_x_ananassa_snap_masked-Fvb4-1-processed-gene-29.32-mRNA-1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| fragaria_x_ananassa_snap_masked-Fvb5-2-processed-gene-149.22-mRNA-1 | Alkaloid | NMT | low | borderline | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| fragaria_x_ananassa_snap_masked-Fvb5-2-processed-gene-51.43-mRNA-1 | Alkaloid | NMT | low | borderline | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| fragaria_x_ananassa_snap_masked-Fvb5-2-processed-gene-54.21-mRNA-1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| fragaria_x_ananassa_snap_masked-Fvb6-3-processed-gene-299.15-mRNA-1 | Alkaloid | NMT | medium | pass | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| fragaria_x_ananassa_snap_masked-Fvb6-3-processed-gene-308.16-mRNA-1 | Alkaloid | NMT | medium | pass | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| fragaria_x_ananassa_snap_masked-Fvb6-4-processed-gene-215.14-mRNA-1 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| fragaria_x_ananassa_snap_masked-Fvb7-1-processed-gene-200.37-mRNA-1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| fragaria_x_ananassa_snap_masked-Fvb7-2-processed-gene-203.36-mRNA-1 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| fragaria_x_ananassa_snap_masked-Fvb7-2-processed-gene-203.37-mRNA-1 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| fragaria_x_ananassa_snap_masked-Fvb7-2-processed-gene-203.38-mRNA-1 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| fragaria_x_ananassa_snap_masked-Fvb7-3-processed-gene-169.19-mRNA-1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |