PlantSME Plant secondary metabolism enzyme database

Gnetum montanum (gnetum_montanum)

Imported from atlas release summary for Gnetum montanum.

2313
Candidate Protein Records
1931
Pathway-Level Records
4504
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Current group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 28.48% Phenylpropanoid pathway 26.67% Alkaloid pathway 21.7% Flavonoid pathway 11.76% Rosmarinic acid pathway 7.3% Steroid pathway 4.09%
Family Distribution
C4H 5.73% BAHD 5.26% C3'H/CYP98A 5.04% UGT 4.48% CYP76 4.31% 7DLGT 4.02% POD 3.46% 4CL 2.93%
Other Families 64.76%
More Families (97)
UFGT 125 2.78% IFS 122 2.71% LAC 112 2.49% NMT 99 2.2% F3'H/CYP75B 97 2.15% G8O/G8H 95 2.11% HCT 94 2.09% SGD 90 2.0% F3H 90 2.0% CAD 90 2.0% BR6OX2/CYP85A2 80 1.78% T3O 76 1.69% COMT 73 1.62% TPS 70 1.55% CODM/T6ODM 66 1.47% DWF4/CYP90B1 66 1.47% ANR 62 1.38% CSE 55 1.22% IFR 54 1.2% GS 52 1.15% RAS 52 1.15% GES 46 1.02% PAL 45 1.0% PMT 44 0.98% H6H 44 0.98% T16H 42 0.93% SMT1/SMT2/SMT3 42 0.93% F3'5'H/CYP75A 40 0.89% STR 39 0.87% IO 39 0.87% PYKS 39 0.87% FNS 38 0.84% CAS 37 0.82% 16OMT 36 0.8% 7DLH 36 0.8% BBE 35 0.78% CYP90D1 35 0.78% CPD/CYP90A1 34 0.75% FPPS 25 0.56% NCS 24 0.53% SLS 24 0.53% ANS/LDOX 24 0.53% CCR 24 0.53% LAMT 23 0.51% F5H/CYP84A 23 0.51% COR 21 0.47% 8HGO 21 0.47% DFR 18 0.4% CHS 18 0.4% CYP71 18 0.4% 6OMT_4OMT_SOMT 17 0.38% TRI/TRII 15 0.33% GGPPS 15 0.33% CYP719 14 0.31% TAT 14 0.31% CCoAOMT 13 0.29% ROT3/CYP90C1 13 0.29% CNMT 12 0.27% XMT_MXMT_DXMT 12 0.27% CYP80B1 12 0.27% BR6OX1/CYP85A1 11 0.24% CYP51G1 9 0.2% ODC 8 0.18% TDC 8 0.18% ISY 7 0.16% AACT 7 0.16% MPO 6 0.13% CHI 5 0.11% HMGR 5 0.11% FLS 4 0.09% HPPR 4 0.09% DET2 4 0.09% SQS/FDFT1 4 0.09% CMK/IspE 4 0.09% ADC 3 0.07% CPR 3 0.07% DWF1 3 0.07% MCT/IspD 3 0.07% MVD 3 0.07% MDS/IspF 3 0.07% TYDC_DDC 2 0.04% SMO1/SMO2 2 0.04% IDI 2 0.04% DXS 2 0.04% MVK 2 0.04% CYP80F1 1 0.02% FK 1 0.02% DWF7 1 0.02% DWF5 1 0.02% SQE 1 0.02% CPI1 1 0.02% HYD1 1 0.02% PMK 1 0.02% DXR 1 0.02% HDR/IspH 1 0.02% HMGS 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 550 19 BAHD (192) View species results
Phenylpropanoid pathway 515 12 POD (148) View species results
Alkaloid pathway 419 27 7DLGT (74) View species results
Flavonoid pathway 227 12 UFGT (101) View species results
Rosmarinic acid pathway 141 7 C4H (46) View species results
Steroid pathway 79 14 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1566 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 383 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Gmonoriginal_scaffold_836200026550 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
Gmonoriginal_scaffold_836200026560 Terpenoid UGT medium pass UGT__00007__sp_A0A0A7HB61_U71A2_PANGI