PlantSME Plant secondary metabolism enzyme database

Gossypium anomalum (gossypium_anomalum)

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Imported from atlas release summary for Gossypium anomalum.

1912
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.03% Phenylpropanoid pathway 22.8% Alkaloid pathway 22.54% Flavonoid pathway 11.98% Rosmarinic acid pathway 7.48% Steroid pathway 6.17%
Family Distribution
C4H 7.26% C3'H/CYP98A 6.23% BAHD 5.12% CYP76 4.11% T3O 3.91% IFS 3.83% POD 3.57% F3H 3.47%
Other Families 62.49%
More Families (97)
UGT 166 3.35% 7DLGT 165 3.33% UFGT 165 3.33% 4CL 162 3.27% DWF4/CYP90B1 105 2.12% F3'H/CYP75B 96 1.94% NMT 94 1.9% BR6OX2/CYP85A2 92 1.86% CODM/T6ODM 87 1.75% STR 87 1.75% CAD 83 1.67% H6H 80 1.61% CYP90D1 74 1.49% LAC 71 1.43% CAS 66 1.33% CYP71 62 1.25% TRI/TRII 61 1.23% GES 61 1.23% TPS 61 1.23% SMT1/SMT2/SMT3 56 1.13% 7DLH 53 1.07% CSE 52 1.05% HCT 48 0.97% COMT 48 0.97% GS 46 0.93% BBE 41 0.83% PYKS 39 0.79% 16OMT 39 0.79% RAS 38 0.77% IFR 35 0.71% IO 34 0.69% G8O/G8H 34 0.69% F3'5'H/CYP75A 31 0.63% ANR 30 0.6% NCS 29 0.58% T16H 29 0.58% F5H/CYP84A 28 0.56% CPD/CYP90A1 28 0.56% SGD 27 0.54% PMT 24 0.48% FNS 24 0.48% ROT3/CYP90C1 24 0.48% BR6OX1/CYP85A1 23 0.46% TAT 22 0.44% CYP51G1 22 0.44% PAL 21 0.42% CCR 21 0.42% SLS 20 0.4% COR 20 0.4% 8HGO 16 0.32% SQE 14 0.28% GGPPS 14 0.28% LAMT 13 0.26% ANS/LDOX 12 0.24% FPPS 12 0.24% CNMT 11 0.22% DFR 10 0.2% CHS 10 0.2% TYDC_DDC 9 0.18% MPO 9 0.18% ISY 9 0.18% CCoAOMT 9 0.18% SQS/FDFT1 8 0.16% HMGR 8 0.16% HMGS 8 0.16% CPR 7 0.14% SMO1/SMO2 7 0.14% CYP80B1 6 0.12% HPPR 6 0.12% DET2 6 0.12% MVK 6 0.12% AACT 6 0.12% DXS 6 0.12% ADC 4 0.08% MVD 4 0.08% DXR 4 0.08% TDC 3 0.06% CYP80F1 3 0.06% CYP719 3 0.06% XMT_MXMT_DXMT 3 0.06% FLS 3 0.06% CHI 3 0.06% HDR/IspH 3 0.06% MCT/IspD 3 0.06% ODC 2 0.04% DWF1 2 0.04% DWF5 2 0.04% MDS/IspF 2 0.04% FK 1 0.02% DWF7 1 0.02% CPI1 1 0.02% HYD1 1 0.02% GPPS 1 0.02% CMK/IspE 1 0.02% HDS/IspG 1 0.02% IDI 1 0.02% PMK 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 555 20 BAHD (201) View species results
Phenylpropanoid pathway 436 11 POD (175) View species results
Alkaloid pathway 431 21 7DLGT (72) View species results
Flavonoid pathway 229 8 UFGT (152) View species results
Rosmarinic acid pathway 143 7 C4H (55) View species results
Steroid pathway 118 12 CAS (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2024 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
gossypium_anomalum_Gano_11G034700.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
gossypium_anomalum_Gano_11G034710.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
gossypium_anomalum_Gano_11G034720.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
gossypium_anomalum_Gano_11G034740.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
gossypium_anomalum_Gano_11G034750.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
gossypium_anomalum_Gano_11G034780.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
gossypium_anomalum_Gano_11G034800.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
gossypium_anomalum_Gano_11G037620.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
gossypium_anomalum_Gano_13G016730.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
gossypium_anomalum_Gano_13G019480.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
gossypium_anomalum_Gano_13G019490.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU