Gossypium anomalum (gossypium_anomalum)
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Imported from atlas release summary for Gossypium anomalum.
1912
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1912
Candidate Genes
C4H
7.26%
C3'H/CYP98A
6.23%
BAHD
5.12%
CYP76
4.11%
T3O
3.91%
IFS
3.83%
POD
3.57%
F3H
3.47%
Other Families
62.49%
More Families (97)
UGT
166
3.35%
7DLGT
165
3.33%
UFGT
165
3.33%
4CL
162
3.27%
DWF4/CYP90B1
105
2.12%
F3'H/CYP75B
96
1.94%
NMT
94
1.9%
BR6OX2/CYP85A2
92
1.86%
CODM/T6ODM
87
1.75%
STR
87
1.75%
CAD
83
1.67%
H6H
80
1.61%
CYP90D1
74
1.49%
LAC
71
1.43%
CAS
66
1.33%
CYP71
62
1.25%
TRI/TRII
61
1.23%
GES
61
1.23%
TPS
61
1.23%
SMT1/SMT2/SMT3
56
1.13%
7DLH
53
1.07%
CSE
52
1.05%
HCT
48
0.97%
COMT
48
0.97%
GS
46
0.93%
BBE
41
0.83%
PYKS
39
0.79%
16OMT
39
0.79%
RAS
38
0.77%
IFR
35
0.71%
IO
34
0.69%
G8O/G8H
34
0.69%
F3'5'H/CYP75A
31
0.63%
ANR
30
0.6%
NCS
29
0.58%
T16H
29
0.58%
F5H/CYP84A
28
0.56%
CPD/CYP90A1
28
0.56%
SGD
27
0.54%
PMT
24
0.48%
FNS
24
0.48%
ROT3/CYP90C1
24
0.48%
BR6OX1/CYP85A1
23
0.46%
TAT
22
0.44%
CYP51G1
22
0.44%
PAL
21
0.42%
CCR
21
0.42%
SLS
20
0.4%
COR
20
0.4%
8HGO
16
0.32%
SQE
14
0.28%
GGPPS
14
0.28%
LAMT
13
0.26%
ANS/LDOX
12
0.24%
FPPS
12
0.24%
CNMT
11
0.22%
DFR
10
0.2%
CHS
10
0.2%
TYDC_DDC
9
0.18%
MPO
9
0.18%
ISY
9
0.18%
CCoAOMT
9
0.18%
SQS/FDFT1
8
0.16%
HMGR
8
0.16%
HMGS
8
0.16%
CPR
7
0.14%
SMO1/SMO2
7
0.14%
CYP80B1
6
0.12%
HPPR
6
0.12%
DET2
6
0.12%
MVK
6
0.12%
AACT
6
0.12%
DXS
6
0.12%
ADC
4
0.08%
MVD
4
0.08%
DXR
4
0.08%
TDC
3
0.06%
CYP80F1
3
0.06%
CYP719
3
0.06%
XMT_MXMT_DXMT
3
0.06%
FLS
3
0.06%
CHI
3
0.06%
HDR/IspH
3
0.06%
MCT/IspD
3
0.06%
ODC
2
0.04%
DWF1
2
0.04%
DWF5
2
0.04%
MDS/IspF
2
0.04%
FK
1
0.02%
DWF7
1
0.02%
CPI1
1
0.02%
HYD1
1
0.02%
GPPS
1
0.02%
CMK/IspE
1
0.02%
HDS/IspG
1
0.02%
IDI
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 555 | 20 | BAHD (201) | View species results |
| Phenylpropanoid pathway | 436 | 11 | POD (175) | View species results |
| Alkaloid pathway | 431 | 21 | 7DLGT (72) | View species results |
| Flavonoid pathway | 229 | 8 | UFGT (152) | View species results |
| Rosmarinic acid pathway | 143 | 7 | C4H (55) | View species results |
| Steroid pathway | 118 | 12 | CAS (55) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2024 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 340 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| gossypium_anomalum_Gano_08G020550.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_09G004450.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| gossypium_anomalum_Gano_09G004950.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| gossypium_anomalum_Gano_09G004980.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| gossypium_anomalum_Gano_09G011870.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_09G012880.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_09G014510.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_09G014910.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_09G015230.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_09G015950.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| gossypium_anomalum_Gano_09G029360.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_10G005970.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_10G009970.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_10G024440.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_10G025120.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_10G025130.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_11G011380.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_11G011390.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_11G023770.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_11G023780.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_11G024530.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_11G024570.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_11G026220.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_11G037250.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| gossypium_anomalum_Gano_11G041310.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_12G000810.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_12G007810.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_12G011200.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_12G012700.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| gossypium_anomalum_Gano_13G002320.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_13G011550.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_13G024050.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_13G024160.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_13G025580.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| gossypium_anomalum_Gano_13G030090.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| gossypium_anomalum_Gano_Contig00053G000040.1 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| gossypium_anomalum_Gano_Contig00079G000010.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |