Gossypium longicalyx (gossypium_longicalyx)
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Imported from atlas release summary for Gossypium longicalyx.
1982
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1982
Candidate Genes
C4H
6.89%
C3'H/CYP98A
6.37%
BAHD
5.22%
IFS
4.1%
CYP76
3.96%
T3O
3.86%
F3H
3.47%
POD
3.45%
Other Families
62.68%
More Families (98)
7DLGT
169
3.37%
UGT
168
3.35%
UFGT
167
3.33%
4CL
162
3.23%
DWF4/CYP90B1
102
2.03%
F3'H/CYP75B
98
1.95%
NMT
97
1.93%
BR6OX2/CYP85A2
96
1.91%
STR
89
1.77%
CODM/T6ODM
86
1.71%
CAD
83
1.65%
H6H
81
1.61%
CAS
75
1.49%
LAC
73
1.45%
CYP90D1
68
1.35%
TRI/TRII
64
1.27%
CYP71
64
1.27%
SMT1/SMT2/SMT3
63
1.25%
TPS
63
1.25%
GES
62
1.23%
CSE
54
1.08%
7DLH
52
1.04%
HCT
49
0.98%
BBE
48
0.96%
COMT
46
0.92%
GS
45
0.9%
RAS
45
0.9%
PYKS
37
0.74%
T16H
36
0.72%
IFR
34
0.68%
NCS
31
0.62%
G8O/G8H
31
0.62%
16OMT
31
0.62%
ANR
31
0.62%
IO
30
0.6%
CPD/CYP90A1
29
0.58%
PAL
27
0.54%
SGD
26
0.52%
PMT
25
0.5%
F3'5'H/CYP75A
25
0.5%
CCR
24
0.48%
F5H/CYP84A
24
0.48%
FNS
23
0.46%
COR
22
0.44%
TAT
22
0.44%
CYP51G1
22
0.44%
ROT3/CYP90C1
22
0.44%
SLS
20
0.4%
BR6OX1/CYP85A1
19
0.38%
8HGO
18
0.36%
GGPPS
16
0.32%
LAMT
14
0.28%
CNMT
13
0.26%
ANS/LDOX
13
0.26%
SQE
13
0.26%
FPPS
12
0.24%
TYDC_DDC
10
0.2%
DFR
10
0.2%
CCoAOMT
10
0.2%
MPO
9
0.18%
CHS
9
0.18%
HPPR
9
0.18%
HMGR
9
0.18%
SQS/FDFT1
8
0.16%
SMO1/SMO2
8
0.16%
ISY
7
0.14%
CPR
7
0.14%
HMGS
7
0.14%
AACT
6
0.12%
DXS
6
0.12%
CYP80B1
5
0.1%
CYP719
5
0.1%
DET2
5
0.1%
MVK
5
0.1%
MVD
5
0.1%
ADC
4
0.08%
FLS
4
0.08%
CHI
4
0.08%
MCT/IspD
4
0.08%
TDC
3
0.06%
ODC
3
0.06%
CYP80F1
3
0.06%
HDR/IspH
3
0.06%
DXR
3
0.06%
DWF1
2
0.04%
DWF5
2
0.04%
MDS/IspF
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
XMT_MXMT_DXMT
1
0.02%
FK
1
0.02%
DWF7
1
0.02%
CPI1
1
0.02%
HYD1
1
0.02%
GPPS
1
0.02%
CMK/IspE
1
0.02%
IDI
1
0.02%
HDS/IspG
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 560 | 21 | BAHD (202) | View species results |
| Alkaloid pathway | 449 | 21 | 7DLGT (79) | View species results |
| Phenylpropanoid pathway | 443 | 11 | POD (168) | View species results |
| Flavonoid pathway | 239 | 10 | UFGT (157) | View species results |
| Rosmarinic acid pathway | 161 | 7 | C4H (62) | View species results |
| Steroid pathway | 130 | 12 | CAS (65) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2016 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 356 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| gossypium_longicalyx_Glon_09G021900.1 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| gossypium_longicalyx_Glon_09G021980.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| gossypium_longicalyx_Glon_09G021990.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| gossypium_longicalyx_Glon_09G029780.1 | Terpenoid | UGT | medium | pass | UGT__00091__sp_Q9LNE6_U89C1_ARATH |
| gossypium_longicalyx_Glon_09G029800.1 | Terpenoid | UGT | medium | pass | UGT__00091__sp_Q9LNE6_U89C1_ARATH |
| gossypium_longicalyx_Glon_09G029810.1 | Terpenoid | UGT | medium | pass | UGT__00091__sp_Q9LNE6_U89C1_ARATH |
| gossypium_longicalyx_Glon_09G029820.1 | Terpenoid | UGT | medium | pass | UGT__00091__sp_Q9LNE6_U89C1_ARATH |
| gossypium_longicalyx_Glon_09G034300.1 | Terpenoid | UGT | medium | pass | UGT__00044__sp_K4GIP0_73C12_BARVU |
| gossypium_longicalyx_Glon_09G036720.1 | Terpenoid | UGT | medium | pass | UGT__00041__sp_K4GGT4_73C11_BARVU |
| gossypium_longicalyx_Glon_09G036730.1 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| gossypium_longicalyx_Glon_09G046990.1 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| gossypium_longicalyx_Glon_09G054650.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| gossypium_longicalyx_Glon_10G000080.1 | Terpenoid | UGT | medium | pass | UGT__00063__sp_P0DO67_GT943_SIRGR |
| gossypium_longicalyx_Glon_10G002050.1 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| gossypium_longicalyx_Glon_10G002060.1 | Terpenoid | UGT | medium | pass | UGT__00117__sp_U5NH37_7DLGT_CATRO |
| gossypium_longicalyx_Glon_10G002070.1 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| gossypium_longicalyx_Glon_10G002080.2 | Terpenoid | UGT | medium | pass | UGT__00117__sp_U5NH37_7DLGT_CATRO |
| gossypium_longicalyx_Glon_10G002090.1 | Terpenoid | UGT | medium | pass | UGT__00117__sp_U5NH37_7DLGT_CATRO |
| gossypium_longicalyx_Glon_10G002100.1 | Terpenoid | UGT | medium | pass | UGT__00117__sp_U5NH37_7DLGT_CATRO |
| gossypium_longicalyx_Glon_10G002110.1 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| gossypium_longicalyx_Glon_10G002190.1 | Terpenoid | UGT | medium | pass | UGT__00117__sp_U5NH37_7DLGT_CATRO |
| gossypium_longicalyx_Glon_10G009390.1 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| gossypium_longicalyx_Glon_10G009400.1 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| gossypium_longicalyx_Glon_10G017520.1 | Terpenoid | UGT | medium | pass | UGT__00077__sp_Q8VZE9_U73B1_ARATH |
| gossypium_longicalyx_Glon_10G020820.1 | Terpenoid | UGT | medium | pass | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| gossypium_longicalyx_Glon_11G005830.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| gossypium_longicalyx_Glon_11G005840.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| gossypium_longicalyx_Glon_11G008010.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| gossypium_longicalyx_Glon_11G010490.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| gossypium_longicalyx_Glon_11G010500.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| gossypium_longicalyx_Glon_11G015580.1 | Terpenoid | UGT | medium | pass | UGT__00037__sp_I1LCI8_FG2KO_SOYBN |
| gossypium_longicalyx_Glon_11G022250.1 | Terpenoid | UGT | medium | pass | UGT__00076__sp_Q8L7M0_TUN_ARATH |
| gossypium_longicalyx_Glon_11G022320.1 | Terpenoid | UGT | medium | pass | UGT__00048__sp_O22182_U84B1_ARATH |
| gossypium_longicalyx_Glon_11G043160.1 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| gossypium_longicalyx_Glon_12G002520.1 | Terpenoid | UGT | medium | pass | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| gossypium_longicalyx_Glon_12G002530.1 | Terpenoid | UGT | medium | pass | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| gossypium_longicalyx_Glon_12G007580.1 | Terpenoid | UGT | low | borderline | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| gossypium_longicalyx_Glon_12G010170.1 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| gossypium_longicalyx_Glon_12G010190.1 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| gossypium_longicalyx_Glon_12G011440.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| gossypium_longicalyx_Glon_12G012630.1 | Terpenoid | UGT | medium | pass | UGT__00102__sp_Q9LZD8_U89A2_ARATH |
| gossypium_longicalyx_Glon_12G018360.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| gossypium_longicalyx_Glon_12G018760.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| gossypium_longicalyx_Glon_12G025810.1 | Terpenoid | UGT | medium | pass | UGT__00101__sp_Q9LVR1_U72E2_ARATH |
| gossypium_longicalyx_Glon_12G025820.1 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| gossypium_longicalyx_Glon_12G028000.1 | Terpenoid | UGT | medium | pass | UGT__00014__sp_A0A172J2G3_UGT43_PUEML |
| gossypium_longicalyx_Glon_12G028010.1 | Terpenoid | UGT | medium | pass | UGT__00014__sp_A0A172J2G3_UGT43_PUEML |
| gossypium_longicalyx_Glon_12G031180.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| gossypium_longicalyx_Glon_12G031760.1 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| gossypium_longicalyx_Glon_12G031960.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |