Gossypium mustelinum (gossypium_mustelinum)
Imported from atlas release summary for Gossypium mustelinum.
5720
Candidate Protein Records
4710
Pathway-Level Records
11701
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
11701
Family-Level Calls
C4H
6.97%
BAHD
6.38%
C3'H/CYP98A
5.83%
IFS
3.96%
CYP76
3.84%
POD
3.66%
T3O
3.54%
F3H
3.51%
Other Families
62.33%
More Families (98)
4CL
411
3.51%
UGT
341
2.91%
UFGT
338
2.89%
7DLGT
330
2.82%
NMT
320
2.73%
DWF4/CYP90B1
231
1.97%
BR6OX2/CYP85A2
220
1.88%
CODM/T6ODM
212
1.81%
STR
206
1.76%
CAS
202
1.73%
F3'H/CYP75B
197
1.68%
H6H
183
1.56%
CAD
171
1.46%
CYP71
166
1.42%
CYP90D1
151
1.29%
LAC
149
1.27%
TRI/TRII
148
1.26%
SMT1/SMT2/SMT3
147
1.26%
TPS
135
1.15%
7DLH
133
1.14%
GES
132
1.13%
HCT
121
1.03%
CSE
121
1.03%
RAS
108
0.92%
GS
105
0.9%
COMT
102
0.87%
IFR
92
0.79%
BBE
83
0.71%
IO
82
0.7%
PYKS
76
0.65%
NCS
74
0.63%
T16H
72
0.62%
16OMT
72
0.62%
G8O/G8H
70
0.6%
PMT
68
0.58%
SGD
67
0.57%
ANR
66
0.56%
COR
65
0.56%
FNS
64
0.55%
CCR
59
0.5%
CPD/CYP90A1
59
0.5%
BR6OX1/CYP85A1
56
0.48%
TAT
53
0.45%
F5H/CYP84A
52
0.44%
ROT3/CYP90C1
52
0.44%
SLS
50
0.43%
F3'5'H/CYP75A
46
0.39%
CYP51G1
46
0.39%
CNMT
43
0.37%
8HGO
42
0.36%
PAL
42
0.36%
SQE
34
0.29%
GGPPS
33
0.28%
DFR
30
0.26%
ANS/LDOX
28
0.24%
LAMT
27
0.23%
MPO
27
0.23%
MVD
27
0.23%
CCoAOMT
26
0.22%
CPR
26
0.22%
FPPS
26
0.22%
ISY
21
0.18%
SQS/FDFT1
21
0.18%
CHS
20
0.17%
SMO1/SMO2
20
0.17%
MCT/IspD
19
0.16%
ADC
18
0.15%
HMGR
17
0.15%
AACT
17
0.15%
HMGS
16
0.14%
CYP719
15
0.13%
DXS
15
0.13%
TYDC_DDC
14
0.12%
HPPR
14
0.12%
MVK
14
0.12%
DXR
14
0.12%
CYP80B1
11
0.09%
CHI
11
0.09%
DET2
11
0.09%
FLS
9
0.08%
DWF5
9
0.08%
TDC
8
0.07%
CYP80F1
7
0.06%
HYD1
7
0.06%
DWF7
7
0.06%
MDS/IspF
6
0.05%
HDR/IspH
6
0.05%
HDS/IspG
5
0.04%
ODC
4
0.03%
6OMT_4OMT_SOMT
4
0.03%
DWF1
4
0.03%
FK
3
0.03%
CPI1
2
0.02%
CMK/IspE
2
0.02%
IDI
2
0.02%
GPPS
2
0.02%
PMK
2
0.02%
XMT_MXMT_DXMT
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1373 | 21 | BAHD (595) | View species results |
| Alkaloid pathway | 1084 | 25 | NMT (185) | View species results |
| Phenylpropanoid pathway | 1031 | 11 | POD (412) | View species results |
| Flavonoid pathway | 506 | 13 | UFGT (309) | View species results |
| Rosmarinic acid pathway | 369 | 7 | C4H (136) | View species results |
| Steroid pathway | 347 | 14 | CAS (179) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 4539 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 975 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| GmusD12G0027910.1 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| GmusD12G0028340.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| GmusD12G0028340.2 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| GmusD12G0028340.3 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| GmusD12G0028340.4 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| GmusD12G0028340.5 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| GmusD12G0030550.1 | Alkaloid | NMT | medium | borderline | NMT__00057__sp_Q9FR44_PEAM1_ARATH |
| GmusD12G0030550.2 | Alkaloid | NMT | medium | borderline | NMT__00057__sp_Q9FR44_PEAM1_ARATH |
| GmusD13G0000400.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| GmusD13G0002110.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| GmusD13G0006890.1 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| GmusD13G0012540.1 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| GmusD13G0012540.2 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| GmusD13G0018930.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| GmusD13G0024750.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| GmusD13G0024750.2 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| GmusD13G0024750.3 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| GmusD13G0025570.1 | Alkaloid | NMT | medium | borderline | NMT__00043__sp_Q8H0D2_DXMT1_COFAR |
| GmusD13G0025580.1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| GmusD13G0027960.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |