Gossypium mustelinum (gossypium_mustelinum)
Imported from atlas release summary for Gossypium mustelinum.
4710
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
4710
Candidate Genes
C4H
6.97%
BAHD
6.38%
C3'H/CYP98A
5.83%
IFS
3.96%
CYP76
3.84%
POD
3.66%
T3O
3.54%
F3H
3.51%
Other Families
62.33%
More Families (98)
4CL
411
3.51%
UGT
341
2.91%
UFGT
338
2.89%
7DLGT
330
2.82%
NMT
320
2.73%
DWF4/CYP90B1
231
1.97%
BR6OX2/CYP85A2
220
1.88%
CODM/T6ODM
212
1.81%
STR
206
1.76%
CAS
202
1.73%
F3'H/CYP75B
197
1.68%
H6H
183
1.56%
CAD
171
1.46%
CYP71
166
1.42%
CYP90D1
151
1.29%
LAC
149
1.27%
TRI/TRII
148
1.26%
SMT1/SMT2/SMT3
147
1.26%
TPS
135
1.15%
7DLH
133
1.14%
GES
132
1.13%
HCT
121
1.03%
CSE
121
1.03%
RAS
108
0.92%
GS
105
0.9%
COMT
102
0.87%
IFR
92
0.79%
BBE
83
0.71%
IO
82
0.7%
PYKS
76
0.65%
NCS
74
0.63%
T16H
72
0.62%
16OMT
72
0.62%
G8O/G8H
70
0.6%
PMT
68
0.58%
SGD
67
0.57%
ANR
66
0.56%
COR
65
0.56%
FNS
64
0.55%
CCR
59
0.5%
CPD/CYP90A1
59
0.5%
BR6OX1/CYP85A1
56
0.48%
TAT
53
0.45%
F5H/CYP84A
52
0.44%
ROT3/CYP90C1
52
0.44%
SLS
50
0.43%
F3'5'H/CYP75A
46
0.39%
CYP51G1
46
0.39%
CNMT
43
0.37%
8HGO
42
0.36%
PAL
42
0.36%
SQE
34
0.29%
GGPPS
33
0.28%
DFR
30
0.26%
ANS/LDOX
28
0.24%
LAMT
27
0.23%
MPO
27
0.23%
MVD
27
0.23%
CCoAOMT
26
0.22%
CPR
26
0.22%
FPPS
26
0.22%
ISY
21
0.18%
SQS/FDFT1
21
0.18%
CHS
20
0.17%
SMO1/SMO2
20
0.17%
MCT/IspD
19
0.16%
ADC
18
0.15%
HMGR
17
0.15%
AACT
17
0.15%
HMGS
16
0.14%
CYP719
15
0.13%
DXS
15
0.13%
TYDC_DDC
14
0.12%
HPPR
14
0.12%
MVK
14
0.12%
DXR
14
0.12%
CYP80B1
11
0.09%
CHI
11
0.09%
DET2
11
0.09%
FLS
9
0.08%
DWF5
9
0.08%
TDC
8
0.07%
CYP80F1
7
0.06%
HYD1
7
0.06%
DWF7
7
0.06%
MDS/IspF
6
0.05%
HDR/IspH
6
0.05%
HDS/IspG
5
0.04%
ODC
4
0.03%
6OMT_4OMT_SOMT
4
0.03%
DWF1
4
0.03%
FK
3
0.03%
CPI1
2
0.02%
CMK/IspE
2
0.02%
IDI
2
0.02%
GPPS
2
0.02%
PMK
2
0.02%
XMT_MXMT_DXMT
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1373 | 21 | BAHD (595) | View species results |
| Alkaloid pathway | 1084 | 25 | NMT (185) | View species results |
| Phenylpropanoid pathway | 1031 | 11 | POD (412) | View species results |
| Flavonoid pathway | 506 | 13 | UFGT (309) | View species results |
| Rosmarinic acid pathway | 369 | 7 | C4H (136) | View species results |
| Steroid pathway | 347 | 14 | CAS (179) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 4539 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 975 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| GmusD07G0006710.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD07G0007000.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD07G0011860.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD07G0011880.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD07G0012950.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD07G0012950.2 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD07G0014930.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD07G0014950.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD07G0014950.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD08G0003360.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD08G0011380.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD08G0014380.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD08G0018640.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD09G0000180.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD09G0011880.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD09G0011880.2 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD09G0011880.3 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD09G0011880.4 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD09G0011880.5 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD09G0011880.6 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD09G0012580.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD09G0012860.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD09G0012860.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD09G0013270.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD09G0013270.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD09G0014960.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD09G0015980.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD09G0022940.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD09G0022990.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD09G0023470.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD10G0007460.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD10G0007470.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD10G0008370.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD10G0020940.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD10G0020950.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD10G0024340.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD11G0010960.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD11G0011680.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD11G0011690.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD11G0023470.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD11G0024070.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD11G0024100.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD11G0024100.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD11G0025560.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD11G0035470.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD11G0035670.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD11G0035680.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD11G0039370.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GmusD12G0018150.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GmusD12G0019720.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |