Gossypium turneri (gossypium_turneri)
/
Imported from atlas release summary for Gossypium turneri.
2471
Candidate Protein Records
2108
Pathway-Level Records
5113
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5113
Family-Level Calls
C4H
6.67%
C3'H/CYP98A
5.73%
BAHD
5.44%
UGT
3.97%
CYP76
3.97%
IFS
3.81%
T3O
3.62%
7DLGT
3.58%
Other Families
63.21%
More Families (98)
POD
180
3.52%
UFGT
175
3.42%
4CL
165
3.23%
F3H
145
2.84%
NMT
99
1.94%
STR
93
1.82%
DWF4/CYP90B1
93
1.82%
F3'H/CYP75B
90
1.76%
BR6OX2/CYP85A2
88
1.72%
H6H
84
1.64%
LAC
83
1.62%
CODM/T6ODM
78
1.53%
TPS
75
1.47%
CYP71
72
1.41%
GES
68
1.33%
CAS
65
1.27%
TRI/TRII
62
1.21%
CAD
62
1.21%
CYP90D1
60
1.17%
SMT1/SMT2/SMT3
60
1.17%
CSE
56
1.1%
G8O/G8H
52
1.02%
BBE
52
1.02%
HCT
52
1.02%
COMT
50
0.98%
T16H
45
0.88%
NCS
44
0.86%
PYKS
41
0.8%
GS
41
0.8%
RAS
40
0.78%
7DLH
37
0.72%
ANS/LDOX
36
0.7%
F3'5'H/CYP75A
36
0.7%
16OMT
35
0.68%
FNS
35
0.68%
IFR
31
0.61%
CPD/CYP90A1
30
0.59%
IO
29
0.57%
SGD
27
0.53%
TAT
26
0.51%
PMT
25
0.49%
F5H/CYP84A
25
0.49%
CCR
25
0.49%
PAL
24
0.47%
ANR
24
0.47%
CYP51G1
23
0.45%
COR
21
0.41%
ROT3/CYP90C1
21
0.41%
SLS
20
0.39%
8HGO
17
0.33%
SQE
16
0.31%
DFR
15
0.29%
BR6OX1/CYP85A1
15
0.29%
GGPPS
15
0.29%
CNMT
13
0.25%
CHS
12
0.23%
LAMT
11
0.22%
ADC
11
0.22%
FLS
11
0.22%
TYDC_DDC
10
0.2%
CPR
10
0.2%
FPPS
10
0.2%
MPO
9
0.18%
HMGR
9
0.18%
MVD
9
0.18%
CYP80B1
8
0.16%
CYP719
8
0.16%
ISY
8
0.16%
CCoAOMT
8
0.16%
HPPR
8
0.16%
SMO1/SMO2
8
0.16%
SQS/FDFT1
7
0.14%
AACT
7
0.14%
MVK
7
0.14%
XMT_MXMT_DXMT
6
0.12%
6OMT_4OMT_SOMT
5
0.1%
TDC
4
0.08%
ODC
4
0.08%
CHI
4
0.08%
DET2
4
0.08%
DXS
4
0.08%
DXR
4
0.08%
HDS/IspG
4
0.08%
CYP80F1
3
0.06%
DWF5
3
0.06%
DWF1
3
0.06%
MDS/IspF
3
0.06%
HMGS
3
0.06%
HDR/IspH
3
0.06%
MCT/IspD
3
0.06%
FK
2
0.04%
CPI1
2
0.04%
DWF7
1
0.02%
HYD1
1
0.02%
PMK
1
0.02%
GPPS
1
0.02%
CMK/IspE
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 623 | 19 | BAHD (218) | View species results |
| Alkaloid pathway | 473 | 27 | 7DLGT (80) | View species results |
| Phenylpropanoid pathway | 456 | 11 | POD (175) | View species results |
| Flavonoid pathway | 265 | 11 | UFGT (169) | View species results |
| Rosmarinic acid pathway | 173 | 7 | C4H (74) | View species results |
| Steroid pathway | 118 | 12 | CAS (50) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1972 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 370 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.08g232510.m01.polypeptide | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.08g232520.m01.polypeptide | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g241200.m01.polypeptide | Terpenoid | UGT | medium | pass | UGT__00091__sp_Q9LNE6_U89C1_ARATH |
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g241210.m01.polypeptide | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g241230.m01.polypeptide | Terpenoid | UGT | medium | pass | UGT__00091__sp_Q9LNE6_U89C1_ARATH |
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g241240.m01.polypeptide | Terpenoid | UGT | medium | pass | UGT__00091__sp_Q9LNE6_U89C1_ARATH |
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g241250.m01.polypeptide | Terpenoid | UGT | medium | pass | UGT__00091__sp_Q9LNE6_U89C1_ARATH |
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g244170.m01.polypeptide | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g245730.m01.polypeptide | Terpenoid | UGT | medium | pass | UGT__00044__sp_K4GIP0_73C12_BARVU |
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g248180.m01.polypeptide | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g248190.m01.polypeptide | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g262550.m01.polypeptide | Terpenoid | UGT | medium | pass | UGT__00076__sp_Q8L7M0_TUN_ARATH |
| Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g263120.m01.polypeptide | Terpenoid | UGT | low | borderline | UGT__00108__sp_Q9SYK9_U74E2_ARATH |