Ilex latifolia (ilex_latifolia)
Imported from atlas release summary for Ilex latifolia.
2441
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2441
Candidate Genes
C4H
6.34%
C3'H/CYP98A
6.22%
UGT
5.59%
7DLGT
5.21%
UFGT
5.04%
BAHD
4.19%
IFS
3.83%
CYP76
3.56%
Other Families
60.01%
More Families (95)
T3O
199
3.4%
F3H
196
3.35%
POD
160
2.74%
4CL
156
2.67%
DWF4/CYP90B1
153
2.62%
CAD
133
2.27%
F3'H/CYP75B
129
2.21%
CODM/T6ODM
122
2.09%
TPS
97
1.66%
CAS
96
1.64%
GES
92
1.57%
H6H
88
1.5%
BR6OX2/CYP85A2
83
1.42%
NMT
76
1.3%
SMT1/SMT2/SMT3
72
1.23%
BBE
71
1.21%
STR
70
1.2%
CYP71
70
1.2%
TRI/TRII
62
1.06%
CSE
62
1.06%
GS
61
1.04%
CYP90D1
59
1.01%
SGD
55
0.94%
IO
54
0.92%
IFR
50
0.85%
LAC
45
0.77%
7DLH
40
0.68%
G8O/G8H
39
0.67%
PYKS
38
0.65%
HCT
38
0.65%
SLS
36
0.62%
COMT
36
0.62%
LAMT
35
0.6%
ANR
35
0.6%
T16H
34
0.58%
CPD/CYP90A1
33
0.56%
CCR
29
0.5%
16OMT
28
0.48%
RAS
28
0.48%
PAL
27
0.46%
PMT
26
0.44%
F3'5'H/CYP75A
26
0.44%
NCS
25
0.43%
TAT
25
0.43%
ROT3/CYP90C1
25
0.43%
FNS
24
0.41%
BR6OX1/CYP85A1
24
0.41%
8HGO
21
0.36%
ANS/LDOX
21
0.36%
CYP51G1
20
0.34%
DFR
19
0.32%
F5H/CYP84A
17
0.29%
ISY
16
0.27%
COR
16
0.27%
SQE
13
0.22%
CYP719
12
0.21%
GGPPS
11
0.19%
FPPS
11
0.19%
MPO
10
0.17%
CNMT
10
0.17%
AACT
10
0.17%
CHS
9
0.15%
CCoAOMT
9
0.15%
CPR
9
0.15%
TYDC_DDC
8
0.14%
HPPR
8
0.14%
SMO1/SMO2
8
0.14%
DXR
8
0.14%
CYP80B1
6
0.1%
MVK
6
0.1%
MVD
6
0.1%
TDC
5
0.09%
SQS/FDFT1
5
0.09%
PMK
5
0.09%
DXS
5
0.09%
CHI
4
0.07%
DET2
4
0.07%
HMGR
4
0.07%
XMT_MXMT_DXMT
3
0.05%
DWF5
3
0.05%
HYD1
3
0.05%
CYP80F1
2
0.03%
FK
2
0.03%
DWF7
2
0.03%
DWF1
2
0.03%
HMGS
2
0.03%
HDR/IspH
2
0.03%
MCT/IspD
2
0.03%
HDS/IspG
2
0.03%
MDS/IspF
2
0.03%
ODC
1
0.02%
ADC
1
0.02%
CPI1
1
0.02%
IDI
1
0.02%
CMK/IspE
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 722 | 19 | UGT (304) | View species results |
| Alkaloid pathway | 576 | 21 | 7DLGT (171) | View species results |
| Phenylpropanoid pathway | 416 | 11 | POD (147) | View species results |
| Flavonoid pathway | 376 | 12 | UFGT (282) | View species results |
| Rosmarinic acid pathway | 192 | 7 | C4H (100) | View species results |
| Steroid pathway | 159 | 12 | CAS (79) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2228 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 311 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| ilex_latifolia_GWHPBIST005356 | Rosmarinic Acid | C4H | medium | pass |
| ilex_latifolia_GWHPBIST005358 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST005359 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST005360 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST005365 | Rosmarinic Acid | C4H | medium | pass |
| ilex_latifolia_GWHPBIST005366 | Rosmarinic Acid | C4H | medium | pass |
| ilex_latifolia_GWHPBIST005367 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST005368 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST005369 | Rosmarinic Acid | C4H | medium | pass |
| ilex_latifolia_GWHPBIST005370 | Rosmarinic Acid | C4H | medium | pass |
| ilex_latifolia_GWHPBIST005371 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST005373 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST005408 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST005899 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST005937 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST006152 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST006718 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST006719 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST006752 | Rosmarinic Acid | C4H | medium | pass |
| ilex_latifolia_GWHPBIST006793 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST006794 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST007046 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST007187 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST007858 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST007861 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008333 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008334 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008338 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008339 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008340 | Rosmarinic Acid | C4H | medium | pass |
| ilex_latifolia_GWHPBIST008341 | Rosmarinic Acid | C4H | medium | pass |
| ilex_latifolia_GWHPBIST008448 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008453 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008454 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008455 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008456 | Rosmarinic Acid | C4H | medium | pass |
| ilex_latifolia_GWHPBIST008457 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008458 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008459 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008461 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008462 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008463 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008464 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008465 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008501 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008585 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST008586 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST009075 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST009137 | Rosmarinic Acid | C4H | low | borderline |
| ilex_latifolia_GWHPBIST009187 | Rosmarinic Acid | C4H | low | borderline |