Ipomoea batatas (ipomoea_batatas)
Imported from atlas release summary for Ipomoea batatas.
3736
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3736
Candidate Genes
C4H
7.38%
BAHD
5.97%
C3'H/CYP98A
5.51%
UGT
5.38%
CYP76
4.4%
7DLGT
4.11%
IFS
3.91%
UFGT
3.7%
Other Families
59.63%
More Families (98)
POD
314
3.63%
4CL
285
3.29%
T3O
235
2.72%
BR6OX2/CYP85A2
194
2.24%
DWF4/CYP90B1
188
2.17%
F3'H/CYP75B
180
2.08%
NMT
149
1.72%
F3H
149
1.72%
CAD
139
1.61%
TPS
139
1.61%
CODM/T6ODM
120
1.39%
LAC
119
1.38%
T16H
114
1.32%
STR
111
1.28%
GES
110
1.27%
CAS
107
1.24%
TRI/TRII
105
1.21%
CSE
99
1.14%
IO
97
1.12%
CYP71
95
1.1%
G8O/G8H
94
1.09%
SMT1/SMT2/SMT3
92
1.06%
H6H
86
0.99%
BBE
80
0.92%
RAS
77
0.89%
7DLH
76
0.88%
FNS
74
0.86%
GS
72
0.83%
HCT
66
0.76%
F5H/CYP84A
60
0.69%
F3'5'H/CYP75A
58
0.67%
CYP90D1
58
0.67%
PYKS
56
0.65%
PMT
54
0.62%
COMT
49
0.57%
TAT
49
0.57%
PAL
45
0.52%
FPPS
45
0.52%
CPD/CYP90A1
43
0.5%
IFR
42
0.49%
8HGO
41
0.47%
ANS/LDOX
41
0.47%
SGD
37
0.43%
DFR
36
0.42%
SLS
33
0.38%
NCS
29
0.34%
CCR
28
0.32%
BR6OX1/CYP85A1
28
0.32%
16OMT
27
0.31%
CHS
27
0.31%
ROT3/CYP90C1
27
0.31%
HMGR
26
0.3%
CYP80B1
25
0.29%
LAMT
23
0.27%
ANR
23
0.27%
AACT
22
0.25%
ISY
21
0.24%
CCoAOMT
21
0.24%
CYP51G1
21
0.24%
COR
19
0.22%
DXS
18
0.21%
SQS/FDFT1
17
0.2%
6OMT_4OMT_SOMT
15
0.17%
GGPPS
15
0.17%
SQE
14
0.16%
CPR
13
0.15%
MPO
12
0.14%
FLS
12
0.14%
HPPR
12
0.14%
MVK
11
0.13%
XMT_MXMT_DXMT
10
0.12%
CNMT
9
0.1%
IDI
9
0.1%
ADC
8
0.09%
CYP719
7
0.08%
TDC
7
0.08%
CHI
7
0.08%
PMK
7
0.08%
HDR/IspH
7
0.08%
TYDC_DDC
6
0.07%
DET2
6
0.07%
MVD
6
0.07%
CYP80F1
5
0.06%
SMO1/SMO2
5
0.06%
DWF1
5
0.06%
ODC
4
0.05%
CPI1
4
0.05%
DWF7
4
0.05%
DWF5
4
0.05%
MCT/IspD
3
0.03%
HDS/IspG
3
0.03%
HMGS
3
0.03%
CMK/IspE
3
0.03%
HYD1
2
0.02%
FK
2
0.02%
DXR
2
0.02%
GPPS
2
0.02%
MDS/IspF
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1205 | 21 | UGT (425) | View species results |
| Alkaloid pathway | 808 | 27 | 7DLGT (179) | View species results |
| Phenylpropanoid pathway | 770 | 13 | POD (283) | View species results |
| Flavonoid pathway | 457 | 15 | UFGT (286) | View species results |
| Rosmarinic acid pathway | 320 | 7 | C4H (148) | View species results |
| Steroid pathway | 176 | 14 | CAS (87) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3473 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 660 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Itrk_sc0004332.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0004403.1_g000002.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0004468.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0004606.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0004873.1_g000008.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0004940.1_g000004.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0005107.1_g000007.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0005150.1_g000003.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0005172.1_g000005.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0005680.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0006183.1_g000003.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0007033.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0007753.1_g000002.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0008032.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0009318.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0009471.1_g000002.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0010536.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0011417.1_g000002.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0013125.1_g000002.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0014492.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0015969.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0017128.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0018745.1_g000002.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0019205.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0019391.1_g000002.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0019536.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0027317.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0027357.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0027464.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0028856.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0029023.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0035400.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0039438.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0039977.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0048912.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0057049.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0059790.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0062243.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0062264.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0064475.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0064717.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0066167.1_g000001.1 | Alkaloid | STR | low | borderline |
| Itrk_sc0067643.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0070238.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0070915.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0077031.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0078394.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0084292.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0092119.1_g000001.1 | Alkaloid | STR | medium | pass |
| Itrk_sc0095748.1_g000001.1 | Alkaloid | STR | medium | pass |