PlantSME Plant secondary metabolism enzyme database

Isoetes taiwanensis (isoetes_taiwanensis)

Imported from atlas release summary for Isoetes taiwanensis.

1858
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Current group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Lycophytes/Ferns
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 23.9% Terpenoid pathway 23.9% Alkaloid pathway 22.93% Flavonoid pathway 14.96% Rosmarinic acid pathway 9.8% Steroid pathway 4.52%
Family Distribution
POD 6.48% C3'H/CYP98A 5.5% C4H 5.45% UGT 5.05% 7DLGT 4.88% BAHD 4.81% UFGT 4.41% CYP76 3.9%
Other Families 59.52%
More Families (97)
4CL 141 3.48% IFS 125 3.08% NMT 124 3.06% T3O 97 2.39% F3H 88 2.17% DWF4/CYP90B1 87 2.14% STR 84 2.07% F3'H/CYP75B 81 2.0% SGD 79 1.95% BR6OX2/CYP85A2 78 1.92% LAC 77 1.9% CODM/T6ODM 71 1.75% PYKS 64 1.58% PAL 60 1.48% CHS 48 1.18% IO 42 1.04% TRI/TRII 40 0.99% CYP71 40 0.99% 7DLH 37 0.91% CSE 37 0.91% SLS 33 0.81% HCT 33 0.81% CYP90D1 33 0.81% 8HGO 31 0.76% H6H 30 0.74% GS 30 0.74% RAS 30 0.74% CMK/IspE 28 0.69% T16H 27 0.67% IFR 27 0.67% SMT1/SMT2/SMT3 27 0.67% HMGR 27 0.67% G8O/G8H 23 0.57% CAD 22 0.54% COMT 22 0.54% FNS 20 0.49% COR 19 0.47% CAS 19 0.47% SMO1/SMO2 18 0.44% CCoAOMT 17 0.42% CCR 17 0.42% CNMT 16 0.39% F3'5'H/CYP75A 15 0.37% GGPPS 15 0.37% DET2 14 0.35% AACT 14 0.35% PMT 13 0.32% 16OMT 13 0.32% DFR 13 0.32% ANR 13 0.32% CPR 13 0.32% DXS 13 0.32% BBE 12 0.3% MVK 12 0.3% CYP51G1 11 0.27% ANS/LDOX 10 0.25% CPD/CYP90A1 10 0.25% TAT 9 0.22% BR6OX1/CYP85A1 9 0.22% SQS/FDFT1 9 0.22% NCS 8 0.2% MPO 8 0.2% F5H/CYP84A 8 0.2% HPPR 8 0.2% FPPS 8 0.2% ISY 7 0.17% TPS 7 0.17% MVD 7 0.17% DWF5 6 0.15% HDS/IspG 6 0.15% DXR 6 0.15% 6OMT_4OMT_SOMT 5 0.12% ROT3/CYP90C1 5 0.12% ODC 4 0.1% LAMT 4 0.1% CHI 4 0.1% PMK 4 0.1% ADC 3 0.07% XMT_MXMT_DXMT 3 0.07% CYP719 3 0.07% SQE 3 0.07% DWF1 3 0.07% CPI1 3 0.07% FK 3 0.07% HDR/IspH 3 0.07% HMGS 3 0.07% CYP80B1 2 0.05% FLS 2 0.05% DWF7 2 0.05% MDS/IspF 2 0.05% TDC 1 0.02% CYP80F1 1 0.02% GES 1 0.02% HYD1 1 0.02% GPPS 1 0.02% MCT/IspD 1 0.02% IDI 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 444 12 POD (233) View species results
Terpenoid pathway 444 20 UGT (166) View species results
Alkaloid pathway 426 17 7DLGT (134) View species results
Flavonoid pathway 278 10 UFGT (160) View species results
Rosmarinic acid pathway 182 7 C4H (93) View species results
Steroid pathway 84 13 SMT1/SMT2/SMT3 (19) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1369 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 258 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
Reset
Gene Pathway Family Confidence Status
ItaiItaiw_v1_scaffold_350247820.1 Alkaloid PYKS high pass
ItaiItaiw_v1_scaffold_350247830.1 Alkaloid PYKS medium pass
ItaiItaiw_v1_scaffold_350247910.1 Alkaloid PYKS low borderline
ItaiItaiw_v1_scaffold_350248130.1 Alkaloid PYKS high pass
ItaiItaiw_v1_scaffold_390260780.1 Alkaloid PYKS low borderline
ItaiItaiw_v1_scaffold_430281980.1 Alkaloid PYKS low borderline
ItaiItaiw_v1_scaffold_540320940.1 Alkaloid PYKS medium pass
ItaiItaiw_v1_scaffold_550323400.1 Alkaloid PYKS low borderline
ItaiItaiw_v1_scaffold_60336850.1 Alkaloid PYKS high pass
ItaiItaiw_v1_scaffold_70361160.1 Alkaloid PYKS low borderline
ItaiItaiw_v1_scaffold_880394560.1 Alkaloid PYKS high pass
ItaiItaiw_v1_scaffold_880394650.1 Alkaloid PYKS low borderline
ItaiItaiw_v1_scaffold_880394660.1 Alkaloid PYKS medium pass
ItaiItaiw_v1_scaffold_930405630.1 Alkaloid PYKS low borderline