PlantSME Plant secondary metabolism enzyme database

Jacaranda mimosifolia (jacaranda_mimosifolia)

Imported from atlas release summary for Jacaranda mimosifolia.

2161
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 34.2% Alkaloid pathway 22.26% Phenylpropanoid pathway 16.34% Flavonoid pathway 14.58% Rosmarinic acid pathway 6.71% Steroid pathway 5.92%
Family Distribution
C4H 7.0% UGT 5.45% BAHD 5.34% C3'H/CYP98A 5.28% 7DLGT 5.26% UFGT 5.18% CYP76 4.26% IFS 3.12%
Other Families 59.11%
More Families (96)
POD 150 2.94% T3O 124 2.43% 4CL 124 2.43% F3'H/CYP75B 122 2.39% F3H 113 2.22% TPS 94 1.84% GES 93 1.82% CAD 92 1.8% DWF4/CYP90B1 86 1.69% H6H 85 1.67% BR6OX2/CYP85A2 85 1.67% NMT 82 1.61% CAS 75 1.47% SMT1/SMT2/SMT3 72 1.41% CODM/T6ODM 69 1.35% STR 65 1.28% G8O/G8H 55 1.08% TRI/TRII 51 1.0% PYKS 50 0.98% LAC 50 0.98% F5H/CYP84A 49 0.96% IO 48 0.94% BBE 47 0.92% T16H 46 0.9% HCT 45 0.88% RAS 44 0.86% 7DLH 43 0.84% COMT 39 0.77% CYP71 39 0.77% CYP90D1 38 0.75% GS 37 0.73% TAT 37 0.73% CPD/CYP90A1 37 0.73% SGD 36 0.71% PMT 35 0.69% ANR 35 0.69% ANS/LDOX 34 0.67% FNS 32 0.63% NCS 31 0.61% F3'5'H/CYP75A 31 0.61% IFR 29 0.57% LAMT 28 0.55% 16OMT 26 0.51% SLS 25 0.49% PAL 24 0.47% BR6OX1/CYP85A1 23 0.45% CSE 20 0.39% CCR 20 0.39% GGPPS 20 0.39% COR 18 0.35% CYP80B1 15 0.29% CNMT 15 0.29% 8HGO 15 0.29% FPPS 15 0.29% 6OMT_4OMT_SOMT 14 0.27% CCoAOMT 10 0.2% CYP51G1 10 0.2% SQS/FDFT1 10 0.2% TYDC_DDC 9 0.18% MPO 9 0.18% HPPR 8 0.16% DXS 8 0.16% CYP80F1 7 0.14% CHS 7 0.14% DFR 7 0.14% ROT3/CYP90C1 7 0.14% MVD 7 0.14% AACT 7 0.14% ISY 6 0.12% CYP719 6 0.12% CPR 6 0.12% SQE 6 0.12% SMO1/SMO2 5 0.1% MVK 5 0.1% DET2 4 0.08% HMGR 4 0.08% HDS/IspG 4 0.08% TDC 3 0.06% XMT_MXMT_DXMT 3 0.06% CHI 3 0.06% PMK 3 0.06% CMK/IspE 3 0.06% ADC 2 0.04% IDI 2 0.04% HMGS 2 0.04% MDS/IspF 2 0.04% HDR/IspH 2 0.04% ODC 1 0.02% FK 1 0.02% DWF1 1 0.02% DWF7 1 0.02% CPI1 1 0.02% HYD1 1 0.02% DWF5 1 0.02% MCT/IspD 1 0.02% DXR 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 739 19 UGT (263) View species results
Alkaloid pathway 481 24 7DLGT (120) View species results
Phenylpropanoid pathway 353 13 POD (132) View species results
Flavonoid pathway 315 13 UFGT (249) View species results
Rosmarinic acid pathway 145 7 C4H (46) View species results
Steroid pathway 128 11 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 361 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Gene Pathway Family Confidence Status Best Target
Jmim12G0001610.1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Jmim12G0001620.1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Jmim12G0002850.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jmim12G0003780.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jmim12G0009430.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jmim12G0009440.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jmim13G0001660.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jmim14G0008320.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jmim14G0008340.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jmim15G0009410.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jmim15G0011960.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jmim16G0010690.1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Jmim17G0001800.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jmim17G0004440.1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Jmim18G0007930.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR