PlantSME Plant secondary metabolism enzyme database

Kalanchoe fedtschenkoi (kalanchoe_fedtschenkoi)

Imported from atlas release summary for Kalanchoe fedtschenkoi.

2451
Candidate Protein Records
1927
Pathway-Level Records
4897
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 30.31% Alkaloid pathway 21.07% Phenylpropanoid pathway 20.71% Flavonoid pathway 10.95% Rosmarinic acid pathway 8.93% Steroid pathway 8.04%
Family Distribution
BAHD 6.51% C4H 6.17% C3'H/CYP98A 6.04% 4CL 4.29% CYP76 3.84% POD 3.7% T3O 3.43% IFS 3.29%
Other Families 62.73%
More Families (96)
NMT 159 3.25% UGT 132 2.7% DWF4/CYP90B1 127 2.59% F3H 125 2.55% F3'H/CYP75B 123 2.51% UFGT 119 2.43% 7DLGT 118 2.41% BR6OX2/CYP85A2 98 2.0% STR 94 1.92% CAS 92 1.88% CYP71 81 1.65% TRI/TRII 78 1.59% CODM/T6ODM 69 1.41% SMT1/SMT2/SMT3 63 1.29% CAD 61 1.25% H6H 59 1.2% IFR 55 1.12% TPS 55 1.12% RAS 53 1.08% GES 50 1.02% COMT 49 1.0% FNS 46 0.94% LAC 46 0.94% G8O/G8H 44 0.9% 7DLH 44 0.9% PYKS 44 0.9% CSE 44 0.9% HCT 42 0.86% CYP90D1 42 0.86% T16H 37 0.76% SGD 37 0.76% F5H/CYP84A 34 0.69% TAT 34 0.69% SLS 33 0.67% PMT 32 0.65% FPPS 31 0.63% F3'5'H/CYP75A 29 0.59% 16OMT 26 0.53% 8HGO 25 0.51% IO 24 0.49% CCR 24 0.49% NCS 23 0.47% GS 23 0.47% CPD/CYP90A1 22 0.45% PAL 21 0.43% CCoAOMT 20 0.41% BBE 19 0.39% ROT3/CYP90C1 18 0.37% LAMT 17 0.35% ANR 17 0.35% BR6OX1/CYP85A1 17 0.35% CNMT 15 0.31% ANS/LDOX 15 0.31% CHS 15 0.31% CYP51G1 15 0.31% COR 14 0.29% CPR 14 0.29% HPPR 14 0.29% DFR 13 0.27% SQS/FDFT1 12 0.25% AACT 12 0.25% DXS 12 0.25% DET2 11 0.22% GGPPS 10 0.2% CYP719 9 0.18% MVK 8 0.16% ISY 7 0.14% SQE 7 0.14% CYP80F1 6 0.12% CYP80B1 6 0.12% TYDC_DDC 6 0.12% TDC 6 0.12% XMT_MXMT_DXMT 6 0.12% MVD 6 0.12% MPO 5 0.1% SMO1/SMO2 4 0.08% HMGR 4 0.08% DXR 4 0.08% CMK/IspE 4 0.08% MDS/IspF 4 0.08% HMGS 4 0.08% FLS 3 0.06% CHI 3 0.06% DWF1 3 0.06% HDS/IspG 3 0.06% HDR/IspH 3 0.06% HYD1 2 0.04% DWF7 2 0.04% MCT/IspD 2 0.04% IDI 2 0.04% ADC 1 0.02% 6OMT_4OMT_SOMT 1 0.02% DWF5 1 0.02% CPI1 1 0.02% FK 1 0.02% PMK 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 584 19 BAHD (267) View species results
Alkaloid pathway 406 21 NMT (90) View species results
Phenylpropanoid pathway 399 11 POD (176) View species results
Flavonoid pathway 211 11 UFGT (113) View species results
Rosmarinic acid pathway 172 7 C4H (67) View species results
Steroid pathway 155 12 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1924 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 414 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Protein/Isoform Record Pathway Family Confidence Status
KfedScaffold_820266360.2 Rosmarinic Acid 4CL medium pass
KfedScaffold_820266360.3 Rosmarinic Acid 4CL medium pass
KfedScaffold_820266360.4 Rosmarinic Acid 4CL medium pass
KfedScaffold_850273400.1 Rosmarinic Acid 4CL low borderline
KfedScaffold_850273400.2 Rosmarinic Acid 4CL low borderline
KfedScaffold_860274380.1 Rosmarinic Acid 4CL medium pass
KfedScaffold_8780278920.1 Rosmarinic Acid 4CL low borderline
KfedScaffold_8780278920.2 Rosmarinic Acid 4CL low borderline
KfedScaffold_950301220.1 Rosmarinic Acid 4CL medium pass
KfedScaffold_9670304480.1 Rosmarinic Acid 4CL medium pass