PlantSME Plant secondary metabolism enzyme database

Leersia perrieri (leersia_perrieri)

Imported from atlas release summary for Leersia perrieri.

2234
Candidate Protein Records
1689
Pathway-Level Records
4710
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 30.79% Alkaloid pathway 22.38% Phenylpropanoid pathway 15.81% Flavonoid pathway 15.45% Rosmarinic acid pathway 8.17% Steroid pathway 7.4%
Family Distribution
BAHD 6.5% C4H 6.18% C3'H/CYP98A 6.16% UGT 4.33% 7DLGT 3.99% UFGT 3.97% 4CL 3.63% CYP76 3.31%
Other Families 61.93%
More Families (96)
T3O 155 3.29% IFS 143 3.04% F3'H/CYP75B 123 2.61% POD 121 2.57% DWF4/CYP90B1 119 2.53% NMT 111 2.36% STR 110 2.34% SMT1/SMT2/SMT3 105 2.23% BR6OX2/CYP85A2 92 1.95% F3H 84 1.78% CYP71 81 1.72% G8O/G8H 56 1.19% CAS 54 1.15% TRI/TRII 52 1.1% IFR 51 1.08% PMT 50 1.06% CODM/T6ODM 50 1.06% PYKS 46 0.98% CAD 46 0.98% SLS 45 0.96% HCT 45 0.96% CSE 45 0.96% RAS 45 0.96% CCR 43 0.91% NCS 42 0.89% SGD 42 0.89% ANR 40 0.85% CYP90D1 40 0.85% PAL 39 0.83% FNS 38 0.81% T16H 37 0.79% GES 36 0.76% TPS 35 0.74% GS 33 0.7% LAC 33 0.7% F5H/CYP84A 32 0.68% COMT 32 0.68% H6H 28 0.59% CYP51G1 28 0.59% 16OMT 27 0.57% BR6OX1/CYP85A1 25 0.53% ANS/LDOX 23 0.49% F3'5'H/CYP75A 23 0.49% CHS 23 0.49% CPD/CYP90A1 22 0.47% IO 21 0.45% COR 19 0.4% 8HGO 19 0.4% DFR 19 0.4% FPPS 18 0.38% 7DLH 16 0.34% LAMT 16 0.34% CNMT 15 0.32% TAT 14 0.3% AACT 14 0.3% CYP80B1 12 0.25% GGPPS 12 0.25% BBE 11 0.23% CCoAOMT 10 0.21% CPR 10 0.21% SQS/FDFT1 10 0.21% MPO 9 0.19% TDC 8 0.17% CYP719 8 0.17% ROT3/CYP90C1 8 0.17% MVK 8 0.17% TYDC_DDC 7 0.15% XMT_MXMT_DXMT 6 0.13% CHI 6 0.13% HMGS 6 0.13% FK 5 0.11% HPPR 4 0.08% HYD1 4 0.08% SMO1/SMO2 4 0.08% MVD 4 0.08% HMGR 4 0.08% CYP80F1 3 0.06% DWF1 3 0.06% MCT/IspD 3 0.06% DXS 3 0.06% IDI 3 0.06% ODC 2 0.04% ISY 2 0.04% ADC 2 0.04% 6OMT_4OMT_SOMT 2 0.04% FLS 2 0.04% DET2 2 0.04% SQE 2 0.04% MDS/IspF 2 0.04% PMK 2 0.04% HDR/IspH 2 0.04% DWF7 1 0.02% DWF5 1 0.02% CPI1 1 0.02% DXR 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 520 17 BAHD (204) View species results
Alkaloid pathway 378 22 7DLGT (83) View species results
Phenylpropanoid pathway 267 11 POD (93) View species results
Flavonoid pathway 261 11 UFGT (170) View species results
Rosmarinic acid pathway 138 7 C4H (61) View species results
Steroid pathway 125 12 SMT1/SMT2/SMT3 (54) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1826 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 396 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Lperr12G0006860.1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Lperr12G0013760.1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Lperr12G0013770.1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Lperr12G0013780.1 Terpenoid CYP76 low borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
Lperr12G0013820.1 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Lperr12G0013830.1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO