PlantSME Plant secondary metabolism enzyme database

Leersia perrieri (leersia_perrieri)

Imported from atlas release summary for Leersia perrieri.

1689
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.79% Alkaloid pathway 22.38% Phenylpropanoid pathway 15.81% Flavonoid pathway 15.45% Rosmarinic acid pathway 8.17% Steroid pathway 7.4%
Family Distribution
BAHD 6.5% C4H 6.18% C3'H/CYP98A 6.16% UGT 4.33% 7DLGT 3.99% UFGT 3.97% 4CL 3.63% CYP76 3.31%
Other Families 61.93%
More Families (96)
T3O 155 3.29% IFS 143 3.04% F3'H/CYP75B 123 2.61% POD 121 2.57% DWF4/CYP90B1 119 2.53% NMT 111 2.36% STR 110 2.34% SMT1/SMT2/SMT3 105 2.23% BR6OX2/CYP85A2 92 1.95% F3H 84 1.78% CYP71 81 1.72% G8O/G8H 56 1.19% CAS 54 1.15% TRI/TRII 52 1.1% IFR 51 1.08% PMT 50 1.06% CODM/T6ODM 50 1.06% PYKS 46 0.98% CAD 46 0.98% SLS 45 0.96% HCT 45 0.96% CSE 45 0.96% RAS 45 0.96% CCR 43 0.91% NCS 42 0.89% SGD 42 0.89% ANR 40 0.85% CYP90D1 40 0.85% PAL 39 0.83% FNS 38 0.81% T16H 37 0.79% GES 36 0.76% TPS 35 0.74% GS 33 0.7% LAC 33 0.7% F5H/CYP84A 32 0.68% COMT 32 0.68% H6H 28 0.59% CYP51G1 28 0.59% 16OMT 27 0.57% BR6OX1/CYP85A1 25 0.53% ANS/LDOX 23 0.49% F3'5'H/CYP75A 23 0.49% CHS 23 0.49% CPD/CYP90A1 22 0.47% IO 21 0.45% COR 19 0.4% 8HGO 19 0.4% DFR 19 0.4% FPPS 18 0.38% 7DLH 16 0.34% LAMT 16 0.34% CNMT 15 0.32% TAT 14 0.3% AACT 14 0.3% CYP80B1 12 0.25% GGPPS 12 0.25% BBE 11 0.23% CCoAOMT 10 0.21% CPR 10 0.21% SQS/FDFT1 10 0.21% MPO 9 0.19% TDC 8 0.17% CYP719 8 0.17% ROT3/CYP90C1 8 0.17% MVK 8 0.17% TYDC_DDC 7 0.15% XMT_MXMT_DXMT 6 0.13% CHI 6 0.13% HMGS 6 0.13% FK 5 0.11% HPPR 4 0.08% HYD1 4 0.08% SMO1/SMO2 4 0.08% MVD 4 0.08% HMGR 4 0.08% CYP80F1 3 0.06% DWF1 3 0.06% MCT/IspD 3 0.06% DXS 3 0.06% IDI 3 0.06% ODC 2 0.04% ISY 2 0.04% ADC 2 0.04% 6OMT_4OMT_SOMT 2 0.04% FLS 2 0.04% DET2 2 0.04% SQE 2 0.04% MDS/IspF 2 0.04% PMK 2 0.04% HDR/IspH 2 0.04% DWF7 1 0.02% DWF5 1 0.02% CPI1 1 0.02% DXR 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 520 17 BAHD (204) View species results
Alkaloid pathway 378 22 7DLGT (83) View species results
Phenylpropanoid pathway 267 11 POD (93) View species results
Flavonoid pathway 261 11 UFGT (170) View species results
Rosmarinic acid pathway 138 7 C4H (61) View species results
Steroid pathway 125 12 SMT1/SMT2/SMT3 (54) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1826 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 396 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Lperr09G0004830.1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Lperr09G0006480.1 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Lperr09G0006660.1 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
Lperr09G0014780.1 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Lperr10G0010190.1 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
Lperr11G0001630.1 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Lperr12G0001760.1 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Lperr12G0006140.1 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Lperr12G0015200.1 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Lperr12G0015200.2 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Lperr12G0015200.3 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH