PlantSME Plant secondary metabolism enzyme database

Lupinus angustifolius (lupinus_angustifolius)

Imported from atlas release summary for Lupinus angustifolius.

1498
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.17% Phenylpropanoid pathway 23.1% Alkaloid pathway 20.29% Flavonoid pathway 13.42% Rosmarinic acid pathway 8.14% Steroid pathway 6.88%
Family Distribution
BAHD 6.18% C3'H/CYP98A 5.51% C4H 5.34% POD 4.89% 4CL 4.03% UGT 3.69% UFGT 3.55% 7DLGT 3.52%
Other Families 63.28%
More Families (96)
T3O 124 3.47% IFS 123 3.44% F3H 112 3.13% CYP76 107 2.99% NMT 98 2.74% DWF4/CYP90B1 77 2.15% CODM/T6ODM 74 2.07% STR 72 2.01% BR6OX2/CYP85A2 62 1.73% SMT1/SMT2/SMT3 62 1.73% F3'H/CYP75B 59 1.65% CAD 56 1.57% H6H 48 1.34% PYKS 45 1.26% CYP71 45 1.26% CSE 43 1.2% PAL 42 1.17% COMT 41 1.15% CAS 40 1.12% GS 36 1.01% LAC 36 1.01% IFR 35 0.98% RAS 34 0.95% TRI/TRII 32 0.89% PMT 31 0.87% HCT 31 0.87% SGD 29 0.81% 16OMT 29 0.81% ANR 27 0.76% T16H 26 0.73% 7DLH 26 0.73% CYP90D1 25 0.7% CCR 23 0.64% BR6OX1/CYP85A1 23 0.64% TAT 19 0.53% IO 18 0.5% COR 18 0.5% F3'5'H/CYP75A 18 0.5% TPS 18 0.5% GES 17 0.48% CNMT 16 0.45% 8HGO 16 0.45% BBE 16 0.45% CYP51G1 16 0.45% SLS 15 0.42% NCS 15 0.42% DFR 15 0.42% CPR 15 0.42% FNS 14 0.39% ANS/LDOX 13 0.36% CHS 12 0.34% F5H/CYP84A 11 0.31% G8O/G8H 10 0.28% ROT3/CYP90C1 10 0.28% GGPPS 10 0.28% MPO 9 0.25% DXS 9 0.25% LAMT 8 0.22% CCoAOMT 8 0.22% CPD/CYP90A1 8 0.22% AACT 8 0.22% HMGR 8 0.22% ISY 7 0.2% CHI 7 0.2% SQS/FDFT1 7 0.2% FPPS 7 0.2% MVD 7 0.2% DXR 6 0.17% IDI 6 0.17% SQE 5 0.14% DET2 5 0.14% SMO1/SMO2 5 0.14% MVK 5 0.14% CYP719 4 0.11% XMT_MXMT_DXMT 4 0.11% HPPR 4 0.11% ODC 3 0.08% TYDC_DDC 3 0.08% DWF7 3 0.08% DWF1 3 0.08% MCT/IspD 3 0.08% CMK/IspE 3 0.08% HDS/IspG 3 0.08% CYP80B1 2 0.06% ADC 2 0.06% TDC 2 0.06% HYD1 2 0.06% HMGS 2 0.06% HDR/IspH 2 0.06% MDS/IspF 2 0.06% 6OMT_4OMT_SOMT 1 0.03% DWF5 1 0.03% CPI1 1 0.03% FK 1 0.03% GPPS 1 0.03% PMK 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 422 19 BAHD (176) View species results
Phenylpropanoid pathway 346 11 POD (165) View species results
Alkaloid pathway 304 18 7DLGT (64) View species results
Flavonoid pathway 201 8 UFGT (123) View species results
Rosmarinic acid pathway 122 7 C4H (45) View species results
Steroid pathway 103 12 SMT1/SMT2/SMT3 (43) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1197 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 286 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status Best Target
LangScaffold_224_180010310.1 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
LangScaffold_22_580010680.1 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
LangScaffold_290_90013100.1 Terpenoid CYP76 medium pass CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI
LangScaffold_32_820014400.1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
LangScaffold_32_820014420.1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
LangScaffold_41_3080015780.1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
LangScaffold_47_330016520.1 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU