PlantSME Plant secondary metabolism enzyme database

Petrea volubilis (petrea_volubilis)

Imported from atlas release summary for Petrea volubilis.

2257
Candidate Protein Records
1980
Pathway-Level Records
5040
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 32.22% Alkaloid pathway 19.9% Phenylpropanoid pathway 18.28% Flavonoid pathway 16.11% Rosmarinic acid pathway 8.69% Steroid pathway 4.8%
Family Distribution
C4H 6.41% C3'H/CYP98A 6.13% UGT 5.75% 7DLGT 5.3% UFGT 5.12% BAHD 5.1% CYP76 4.44% IFS 4.19%
Other Families 57.56%
More Families (96)
T3O 178 3.53% 4CL 150 2.98% POD 144 2.86% F3H 115 2.28% BR6OX2/CYP85A2 113 2.24% F3'H/CYP75B 109 2.16% DWF4/CYP90B1 108 2.14% CAD 88 1.75% STR 82 1.63% CODM/T6ODM 76 1.51% NMT 70 1.39% SMT1/SMT2/SMT3 59 1.17% LAC 57 1.13% CYP71 55 1.09% TPS 52 1.03% H6H 51 1.01% BBE 50 0.99% CAS 47 0.93% G8O/G8H 46 0.91% GES 46 0.91% RAS 44 0.87% T16H 43 0.85% IFR 43 0.85% HCT 43 0.85% CYP90D1 43 0.85% SLS 41 0.81% TRI/TRII 41 0.81% CSE 40 0.79% GS 39 0.77% 7DLH 38 0.75% ANR 37 0.73% IO 36 0.71% NCS 35 0.69% F5H/CYP84A 35 0.69% CPD/CYP90A1 35 0.69% FNS 34 0.67% SGD 33 0.65% PYKS 31 0.62% PMT 28 0.56% TAT 28 0.56% F3'5'H/CYP75A 26 0.52% COMT 26 0.52% CCR 24 0.48% ANS/LDOX 21 0.42% CYP51G1 19 0.38% GGPPS 19 0.38% DFR 18 0.36% 16OMT 16 0.32% LAMT 16 0.32% BR6OX1/CYP85A1 16 0.32% 8HGO 15 0.3% COR 15 0.3% FPPS 15 0.3% CYP80B1 14 0.28% CCoAOMT 14 0.28% ROT3/CYP90C1 13 0.26% PAL 12 0.24% HPPR 12 0.24% MPO 11 0.22% ISY 10 0.2% CPR 9 0.18% SQE 8 0.16% DXS 8 0.16% CNMT 7 0.14% AACT 7 0.14% CYP719 6 0.12% SQS/FDFT1 6 0.12% TYDC_DDC 5 0.1% CHS 5 0.1% SMO1/SMO2 5 0.1% MVK 5 0.1% CYP80F1 4 0.08% 6OMT_4OMT_SOMT 4 0.08% HMGR 4 0.08% HYD1 3 0.06% DET2 3 0.06% DWF7 3 0.06% HMGS 3 0.06% IDI 3 0.06% MVD 3 0.06% TDC 2 0.04% XMT_MXMT_DXMT 2 0.04% ADC 2 0.04% CHI 2 0.04% FK 2 0.04% PMK 2 0.04% HDS/IspG 2 0.04% MCT/IspD 2 0.04% HDR/IspH 2 0.04% ODC 1 0.02% DWF5 1 0.02% CPI1 1 0.02% MDS/IspF 1 0.02% GPPS 1 0.02% CMK/IspE 1 0.02% DXR 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 UGT (269) View species results
Alkaloid pathway 394 21 7DLGT (107) View species results
Phenylpropanoid pathway 362 12 POD (136) View species results
Flavonoid pathway 319 10 UFGT (242) View species results
Rosmarinic acid pathway 172 7 C4H (82) View species results
Steroid pathway 95 11 CAS (36) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2045 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Protein/Isoform Record Pathway Family Confidence Status Best Target
petrea_volubilis_Petvo.S007510.1 Flavonoid UFGT high pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
petrea_volubilis_Petvo.S007520.1 Flavonoid UFGT high pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
petrea_volubilis_Petvo.S010770.1 Flavonoid UFGT high pass UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
petrea_volubilis_Petvo.S010860.1 Flavonoid UFGT medium pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
petrea_volubilis_Petvo.S010870.1 Flavonoid UFGT high pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
petrea_volubilis_Petvo.S010880.1 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
petrea_volubilis_Petvo.S012460.1 Flavonoid UFGT high pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
petrea_volubilis_Petvo.S021420.1 Flavonoid UFGT high pass UFGT__00004__sp_Q96493_UFOG_GENTR