Pistacia vera (pistacia_vera)
Imported from atlas release summary for Pistacia vera.
2348
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2348
Candidate Genes
C4H
6.15%
C3'H/CYP98A
6.11%
BAHD
5.1%
UGT
5.01%
UFGT
4.81%
7DLGT
4.71%
IFS
4.29%
CYP76
3.62%
Other Families
60.19%
More Families (97)
T3O
190
3.43%
POD
183
3.3%
4CL
171
3.08%
DWF4/CYP90B1
153
2.76%
F3H
148
2.67%
CODM/T6ODM
101
1.82%
CAD
99
1.79%
BR6OX2/CYP85A2
99
1.79%
F3'H/CYP75B
96
1.73%
NMT
88
1.59%
CAS
82
1.48%
SMT1/SMT2/SMT3
81
1.46%
STR
80
1.44%
CYP71
75
1.35%
H6H
65
1.17%
TRI/TRII
61
1.1%
GES
58
1.05%
TPS
58
1.05%
LAC
53
0.96%
COMT
52
0.94%
HCT
51
0.92%
IFR
47
0.85%
CSE
46
0.83%
T16H
44
0.79%
IO
44
0.79%
CYP90D1
44
0.79%
16OMT
43
0.78%
TAT
43
0.78%
SGD
41
0.74%
GS
40
0.72%
PYKS
39
0.7%
G8O/G8H
36
0.65%
7DLH
36
0.65%
PMT
36
0.65%
F3'5'H/CYP75A
35
0.63%
RAS
35
0.63%
NCS
32
0.58%
COR
31
0.56%
SLS
31
0.56%
CPD/CYP90A1
29
0.52%
BBE
28
0.5%
FNS
27
0.49%
CCR
27
0.49%
LAMT
26
0.47%
ANR
26
0.47%
BR6OX1/CYP85A1
26
0.47%
8HGO
25
0.45%
HPPR
23
0.41%
CYP51G1
23
0.41%
F5H/CYP84A
22
0.4%
PAL
21
0.38%
CHS
20
0.36%
DFR
20
0.36%
ANS/LDOX
17
0.31%
GGPPS
17
0.31%
CNMT
14
0.25%
ROT3/CYP90C1
14
0.25%
CYP719
13
0.23%
SQE
13
0.23%
MPO
11
0.2%
CHI
9
0.16%
ISY
8
0.14%
FPPS
8
0.14%
TYDC_DDC
7
0.13%
CCoAOMT
7
0.13%
SQS/FDFT1
7
0.13%
FK
7
0.13%
CPR
6
0.11%
DXS
6
0.11%
CYP80F1
5
0.09%
FLS
5
0.09%
DWF1
5
0.09%
SMO1/SMO2
5
0.09%
DWF7
5
0.09%
AACT
5
0.09%
HMGS
5
0.09%
XMT_MXMT_DXMT
4
0.07%
DET2
4
0.07%
DXR
4
0.07%
HMGR
4
0.07%
TDC
3
0.05%
ODC
3
0.05%
MVD
3
0.05%
PMK
3
0.05%
MVK
3
0.05%
MCT/IspD
3
0.05%
ADC
2
0.04%
CYP80B1
2
0.04%
CPI1
2
0.04%
IDI
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
HYD1
1
0.02%
DWF5
1
0.02%
CMK/IspE
1
0.02%
HDR/IspH
1
0.02%
HDS/IspG
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 673 | 19 | UGT (264) | View species results |
| Alkaloid pathway | 510 | 23 | 7DLGT (129) | View species results |
| Phenylpropanoid pathway | 423 | 11 | POD (179) | View species results |
| Flavonoid pathway | 365 | 11 | UFGT (249) | View species results |
| Rosmarinic acid pathway | 211 | 7 | C4H (79) | View species results |
| Steroid pathway | 166 | 13 | CAS (62) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2136 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 369 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| cds-EVM0000008.1 | Phenylpropanoid | CAD | medium | pass | CAD__00009__sp_P42734_CADH9_ARATH |
| cds-EVM0000240.1 | Phenylpropanoid | CAD | low | borderline | CAD__00011__sp_Q02971_CADH7_ARATH |
| cds-EVM0000422.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0000457.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| cds-EVM0000478.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0000948.1 | Phenylpropanoid | CAD | low | borderline | CAD__00010__sp_P48523_CADH4_ARATH |
| cds-EVM0001507.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| cds-EVM0001805.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| cds-EVM0001812.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0001917.1 | Phenylpropanoid | CAD | low | borderline | CAD__00011__sp_Q02971_CADH7_ARATH |
| cds-EVM0002172.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0002285.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| cds-EVM0003206.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| cds-EVM0003355.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0003522.1 | Phenylpropanoid | CAD | medium | pass | CAD__00014__sp_Q2KNL5_CADH1_OCIBA |
| cds-EVM0003625.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| cds-EVM0004120.1 | Phenylpropanoid | CAD | medium | pass | CAD__00009__sp_P42734_CADH9_ARATH |
| cds-EVM0004680.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| cds-EVM0004718.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| cds-EVM0004896.1 | Phenylpropanoid | CAD | low | borderline | CAD__00008__sp_O49482_CADH5_ARATH |
| cds-EVM0005244.1 | Phenylpropanoid | CAD | medium | pass | CAD__00014__sp_Q2KNL5_CADH1_OCIBA |
| cds-EVM0005694.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0005743.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| cds-EVM0005744.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0006038.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| cds-EVM0006188.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0006198.1 | Phenylpropanoid | CAD | low | borderline | CAD__00011__sp_Q02971_CADH7_ARATH |
| cds-EVM0006265.1 | Phenylpropanoid | CAD | medium | pass | CAD__00011__sp_Q02971_CADH7_ARATH |
| cds-EVM0006329.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0006365.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0006549.1 | Phenylpropanoid | CAD | medium | pass | CAD__00014__sp_Q2KNL5_CADH1_OCIBA |
| cds-EVM0006706.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0006811.1 | Phenylpropanoid | CAD | medium | pass | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0007111.1 | Phenylpropanoid | CAD | medium | pass | CAD__00011__sp_Q02971_CADH7_ARATH |
| cds-EVM0007341.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| cds-EVM0007396.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0008211.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0008233.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| cds-EVM0008293.1 | Phenylpropanoid | CAD | low | borderline | CAD__00011__sp_Q02971_CADH7_ARATH |
| cds-EVM0008702.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| cds-EVM0008721.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0009441.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0009706.1 | Phenylpropanoid | CAD | medium | pass | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0009845.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0010392.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| cds-EVM0010459.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| cds-EVM0010836.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| cds-EVM0011652.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0011675.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| cds-EVM0011817.1 | Phenylpropanoid | CAD | low | borderline | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |