Pistacia vera (pistacia_vera)
Imported from atlas release summary for Pistacia vera.
2531
Candidate Protein Records
2348
Pathway-Level Records
5546
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5546
Family-Level Calls
C4H
6.15%
C3'H/CYP98A
6.11%
BAHD
5.1%
UGT
5.01%
UFGT
4.81%
7DLGT
4.71%
IFS
4.29%
CYP76
3.62%
Other Families
60.19%
More Families (97)
T3O
190
3.43%
POD
183
3.3%
4CL
171
3.08%
DWF4/CYP90B1
153
2.76%
F3H
148
2.67%
CODM/T6ODM
101
1.82%
CAD
99
1.79%
BR6OX2/CYP85A2
99
1.79%
F3'H/CYP75B
96
1.73%
NMT
88
1.59%
CAS
82
1.48%
SMT1/SMT2/SMT3
81
1.46%
STR
80
1.44%
CYP71
75
1.35%
H6H
65
1.17%
TRI/TRII
61
1.1%
GES
58
1.05%
TPS
58
1.05%
LAC
53
0.96%
COMT
52
0.94%
HCT
51
0.92%
IFR
47
0.85%
CSE
46
0.83%
T16H
44
0.79%
IO
44
0.79%
CYP90D1
44
0.79%
16OMT
43
0.78%
TAT
43
0.78%
SGD
41
0.74%
GS
40
0.72%
PYKS
39
0.7%
G8O/G8H
36
0.65%
7DLH
36
0.65%
PMT
36
0.65%
F3'5'H/CYP75A
35
0.63%
RAS
35
0.63%
NCS
32
0.58%
COR
31
0.56%
SLS
31
0.56%
CPD/CYP90A1
29
0.52%
BBE
28
0.5%
FNS
27
0.49%
CCR
27
0.49%
LAMT
26
0.47%
ANR
26
0.47%
BR6OX1/CYP85A1
26
0.47%
8HGO
25
0.45%
HPPR
23
0.41%
CYP51G1
23
0.41%
F5H/CYP84A
22
0.4%
PAL
21
0.38%
CHS
20
0.36%
DFR
20
0.36%
ANS/LDOX
17
0.31%
GGPPS
17
0.31%
CNMT
14
0.25%
ROT3/CYP90C1
14
0.25%
CYP719
13
0.23%
SQE
13
0.23%
MPO
11
0.2%
CHI
9
0.16%
ISY
8
0.14%
FPPS
8
0.14%
TYDC_DDC
7
0.13%
CCoAOMT
7
0.13%
SQS/FDFT1
7
0.13%
FK
7
0.13%
CPR
6
0.11%
DXS
6
0.11%
CYP80F1
5
0.09%
FLS
5
0.09%
DWF1
5
0.09%
SMO1/SMO2
5
0.09%
DWF7
5
0.09%
AACT
5
0.09%
HMGS
5
0.09%
XMT_MXMT_DXMT
4
0.07%
DET2
4
0.07%
DXR
4
0.07%
HMGR
4
0.07%
TDC
3
0.05%
ODC
3
0.05%
MVD
3
0.05%
PMK
3
0.05%
MVK
3
0.05%
MCT/IspD
3
0.05%
ADC
2
0.04%
CYP80B1
2
0.04%
CPI1
2
0.04%
IDI
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
HYD1
1
0.02%
DWF5
1
0.02%
CMK/IspE
1
0.02%
HDR/IspH
1
0.02%
HDS/IspG
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 673 | 19 | UGT (264) | View species results |
| Alkaloid pathway | 510 | 23 | 7DLGT (129) | View species results |
| Phenylpropanoid pathway | 423 | 11 | POD (179) | View species results |
| Flavonoid pathway | 365 | 11 | UFGT (249) | View species results |
| Rosmarinic acid pathway | 211 | 7 | C4H (79) | View species results |
| Steroid pathway | 166 | 13 | CAS (62) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2136 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 369 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| cds-EVM0017484.1 | Phenylpropanoid | LAC | medium | pass | LAC__00003__sp_Q84J37_LAC15_ARATH |
| cds-EVM0017581.1 | Phenylpropanoid | LAC | medium | pass | LAC__00001__sp_O80434_LAC4_ARATH |
| cds-EVM0017637.1 | Phenylpropanoid | LAC | medium | pass | LAC__00003__sp_Q84J37_LAC15_ARATH |
| cds-EVM0017691.1 | Phenylpropanoid | LAC | medium | pass | LAC__00002__sp_O81081_LAC2_ARATH |
| cds-EVM0017800.1 | Phenylpropanoid | LAC | medium | pass | LAC__00001__sp_O80434_LAC4_ARATH |
| cds-EVM0020470.1 | Phenylpropanoid | LAC | medium | pass | LAC__00001__sp_O80434_LAC4_ARATH |
| cds-EVM0021491.1 | Phenylpropanoid | LAC | medium | pass | LAC__00003__sp_Q84J37_LAC15_ARATH |
| cds-EVM0022289.1 | Phenylpropanoid | LAC | medium | pass | LAC__00001__sp_O80434_LAC4_ARATH |
| cds-EVM0022598.1 | Phenylpropanoid | LAC | medium | pass | LAC__00002__sp_O81081_LAC2_ARATH |
| cds-EVM0024252.1 | Phenylpropanoid | LAC | medium | pass | LAC__00002__sp_O81081_LAC2_ARATH |
| cds-EVM0025469.1 | Phenylpropanoid | LAC | medium | pass | LAC__00002__sp_O81081_LAC2_ARATH |
| cds-EVM0025512.1 | Phenylpropanoid | LAC | medium | pass | LAC__00001__sp_O80434_LAC4_ARATH |
| cds-EVM0026354.1 | Phenylpropanoid | LAC | medium | pass | LAC__00002__sp_O81081_LAC2_ARATH |
| cds-EVM0026567.1 | Phenylpropanoid | LAC | medium | pass | LAC__00002__sp_O81081_LAC2_ARATH |
| cds-EVM0027326.1 | Phenylpropanoid | LAC | medium | pass | LAC__00002__sp_O81081_LAC2_ARATH |
| cds-EVM0028350.1 | Phenylpropanoid | LAC | low | borderline | LAC__00001__sp_O80434_LAC4_ARATH |
| cds-EVM0028740.1 | Phenylpropanoid | LAC | medium | pass | LAC__00001__sp_O80434_LAC4_ARATH |
| cds-EVM0028937.1 | Phenylpropanoid | LAC | medium | pass | LAC__00002__sp_O81081_LAC2_ARATH |
| cds-EVM0029375.1 | Phenylpropanoid | LAC | medium | pass | LAC__00004__sp_Q9LFD2_LAC8_ARATH |
| cds-EVM0029659.1 | Phenylpropanoid | LAC | medium | pass | LAC__00001__sp_O80434_LAC4_ARATH |
| cds-EVM0029961.1 | Phenylpropanoid | LAC | medium | pass | LAC__00002__sp_O81081_LAC2_ARATH |
| cds-EVM0030893.1 | Phenylpropanoid | LAC | low | borderline | LAC__00001__sp_O80434_LAC4_ARATH |
| cds-EVM0031039.1 | Phenylpropanoid | LAC | medium | pass | LAC__00001__sp_O80434_LAC4_ARATH |
| cds-EVM0031185.1 | Phenylpropanoid | LAC | medium | pass | LAC__00004__sp_Q9LFD2_LAC8_ARATH |
| cds-EVM0031583.1 | Phenylpropanoid | LAC | medium | pass | LAC__00001__sp_O80434_LAC4_ARATH |
| cds-EVM0001517.1 | Phenylpropanoid | PAL | high | pass | PAL__00002__sp_P35510_PAL1_ARATH |
| cds-EVM0005987.1 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| cds-EVM0012187.1 | Phenylpropanoid | PAL | high | pass | PAL__00005__sp_Q50EX7_PAL1_PETHY |
| cds-EVM0014796.1 | Phenylpropanoid | PAL | high | pass | PAL__00002__sp_P35510_PAL1_ARATH |
| cds-EVM0015107.1 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| cds-EVM0015660.1 | Phenylpropanoid | PAL | high | pass | PAL__00002__sp_P35510_PAL1_ARATH |
| cds-EVM0030666.1 | Phenylpropanoid | PAL | medium | pass | PAL__00002__sp_P35510_PAL1_ARATH |
| cds-EVM0000110.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| cds-EVM0000164.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| cds-EVM0000448.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| cds-EVM0000663.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| cds-EVM0000736.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| cds-EVM0000754.1 | Phenylpropanoid | POD | medium | pass | POD__00023__sp_Q9M7T0_PRX2F_ARATH |
| cds-EVM0001031.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| cds-EVM0001227.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| cds-EVM0001252.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| cds-EVM0001474.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| cds-EVM0001532.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| cds-EVM0001553.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| cds-EVM0001573.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| cds-EVM0001819.1 | Phenylpropanoid | POD | low | borderline | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| cds-EVM0001896.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| cds-EVM0001899.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| cds-EVM0001972.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| cds-EVM0002077.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |