PlantSME Plant secondary metabolism enzyme database

Pleuridium subulatum (pleuridium_subulatum)

Imported from atlas release summary for Pleuridium subulatum.

1060
Candidate Protein Records
726
Pathway-Level Records
2019
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Phenylpropanoid pathway 27.13% Terpenoid pathway 23.55% Alkaloid pathway 21.49% Flavonoid pathway 12.53% Rosmarinic acid pathway 9.37% Steroid pathway 5.92%
Family Distribution
C4H 7.28% C3'H/CYP98A 6.24% POD 5.65% CYP76 5.65% BAHD 4.85% 4CL 3.71% NMT 3.62% IFS 2.97%
Other Families 60.03%
More Families (96)
F3H 50 2.48% BR6OX2/CYP85A2 50 2.48% DWF4/CYP90B1 50 2.48% STR 47 2.33% F3'H/CYP75B 44 2.18% T3O 43 2.13% IFR 40 1.98% UGT 36 1.78% GS 35 1.73% PYKS 32 1.58% 7DLGT 32 1.58% UFGT 32 1.58% IO 31 1.54% H6H 31 1.54% PAL 30 1.49% CODM/T6ODM 27 1.34% G8O/G8H 26 1.29% F3'5'H/CYP75A 24 1.19% CAD 23 1.14% SMT1/SMT2/SMT3 22 1.09% CYP71 21 1.04% CHS 20 0.99% T16H 19 0.94% COMT 18 0.89% NCS 17 0.84% TRI/TRII 16 0.79% ANR 16 0.79% CNMT 15 0.74% FNS 15 0.74% LAC 15 0.74% CAS 15 0.74% CYP80B1 13 0.64% SLS 13 0.64% HCT 12 0.59% F5H/CYP84A 12 0.59% COR 11 0.54% 7DLH 11 0.54% CSE 11 0.54% RAS 11 0.54% SGD 10 0.5% CCR 10 0.5% 16OMT 9 0.45% 8HGO 8 0.4% CPD/CYP90A1 8 0.4% SQS/FDFT1 8 0.4% CYP90D1 8 0.4% LAMT 7 0.35% BBE 7 0.35% AACT 7 0.35% TDC 6 0.3% ANS/LDOX 6 0.3% TAT 6 0.3% BR6OX1/CYP85A1 6 0.3% DET2 6 0.3% CYP719 5 0.25% PMT 5 0.25% MPO 5 0.25% CPR 5 0.25% ROT3/CYP90C1 5 0.25% DWF5 5 0.25% GGPPS 5 0.25% FLS 4 0.2% DFR 4 0.2% CHI 4 0.2% CYP51G1 4 0.2% SQE 4 0.2% DWF1 4 0.2% MVK 4 0.2% ISY 3 0.15% SMO1/SMO2 3 0.15% MDS/IspF 3 0.15% DXS 3 0.15% MVD 3 0.15% MCT/IspD 3 0.15% HMGS 3 0.15% ADC 2 0.1% TYDC_DDC 2 0.1% CCoAOMT 2 0.1% HYD1 2 0.1% PMK 2 0.1% FPPS 2 0.1% DXR 2 0.1% HDS/IspG 2 0.1% HDR/IspH 2 0.1% XMT_MXMT_DXMT 1 0.05% CYP80F1 1 0.05% 6OMT_4OMT_SOMT 1 0.05% GES 1 0.05% HPPR 1 0.05% FK 1 0.05% CPI1 1 0.05% DWF7 1 0.05% HMGR 1 0.05% CMK/IspE 1 0.05% IDI 1 0.05% TPS 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 197 13 POD (106) View species results
Terpenoid pathway 171 19 BAHD (62) View species results
Alkaloid pathway 156 20 NMT (28) View species results
Flavonoid pathway 91 11 UFGT (26) View species results
Rosmarinic acid pathway 68 7 C4H (31) View species results
Steroid pathway 43 13 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 841 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 121 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Psubu490235310 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Psubu490235920 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Psubu526030240940 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Psubu530241100 Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Psubu542710242650 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Psubu570244370 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Psubu589160247500 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Psubu589170247570 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Psubu660251940 Terpenoid CYP76 low borderline CYP76__00015__sp_P0DKI2_C76AN_BETVU
Psubu810259260 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Psubu810259710 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Psubu960263950 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Psubu960263960 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Psubu970264140 Terpenoid CYP76 low borderline CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI