Pleuridium subulatum (pleuridium_subulatum)
Imported from atlas release summary for Pleuridium subulatum.
726
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
726
Candidate Genes
C4H
7.28%
C3'H/CYP98A
6.24%
POD
5.65%
CYP76
5.65%
BAHD
4.85%
4CL
3.71%
NMT
3.62%
IFS
2.97%
Other Families
60.03%
More Families (96)
F3H
50
2.48%
BR6OX2/CYP85A2
50
2.48%
DWF4/CYP90B1
50
2.48%
STR
47
2.33%
F3'H/CYP75B
44
2.18%
T3O
43
2.13%
IFR
40
1.98%
UGT
36
1.78%
GS
35
1.73%
PYKS
32
1.58%
7DLGT
32
1.58%
UFGT
32
1.58%
IO
31
1.54%
H6H
31
1.54%
PAL
30
1.49%
CODM/T6ODM
27
1.34%
G8O/G8H
26
1.29%
F3'5'H/CYP75A
24
1.19%
CAD
23
1.14%
SMT1/SMT2/SMT3
22
1.09%
CYP71
21
1.04%
CHS
20
0.99%
T16H
19
0.94%
COMT
18
0.89%
NCS
17
0.84%
TRI/TRII
16
0.79%
ANR
16
0.79%
CNMT
15
0.74%
FNS
15
0.74%
LAC
15
0.74%
CAS
15
0.74%
CYP80B1
13
0.64%
SLS
13
0.64%
HCT
12
0.59%
F5H/CYP84A
12
0.59%
COR
11
0.54%
7DLH
11
0.54%
CSE
11
0.54%
RAS
11
0.54%
SGD
10
0.5%
CCR
10
0.5%
16OMT
9
0.45%
8HGO
8
0.4%
CPD/CYP90A1
8
0.4%
SQS/FDFT1
8
0.4%
CYP90D1
8
0.4%
LAMT
7
0.35%
BBE
7
0.35%
AACT
7
0.35%
TDC
6
0.3%
ANS/LDOX
6
0.3%
TAT
6
0.3%
BR6OX1/CYP85A1
6
0.3%
DET2
6
0.3%
CYP719
5
0.25%
PMT
5
0.25%
MPO
5
0.25%
CPR
5
0.25%
ROT3/CYP90C1
5
0.25%
DWF5
5
0.25%
GGPPS
5
0.25%
FLS
4
0.2%
DFR
4
0.2%
CHI
4
0.2%
CYP51G1
4
0.2%
SQE
4
0.2%
DWF1
4
0.2%
MVK
4
0.2%
ISY
3
0.15%
SMO1/SMO2
3
0.15%
MDS/IspF
3
0.15%
DXS
3
0.15%
MVD
3
0.15%
MCT/IspD
3
0.15%
HMGS
3
0.15%
ADC
2
0.1%
TYDC_DDC
2
0.1%
CCoAOMT
2
0.1%
HYD1
2
0.1%
PMK
2
0.1%
FPPS
2
0.1%
DXR
2
0.1%
HDS/IspG
2
0.1%
HDR/IspH
2
0.1%
XMT_MXMT_DXMT
1
0.05%
CYP80F1
1
0.05%
6OMT_4OMT_SOMT
1
0.05%
GES
1
0.05%
HPPR
1
0.05%
FK
1
0.05%
CPI1
1
0.05%
DWF7
1
0.05%
HMGR
1
0.05%
CMK/IspE
1
0.05%
IDI
1
0.05%
TPS
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 197 | 13 | POD (106) | View species results |
| Terpenoid pathway | 171 | 19 | BAHD (62) | View species results |
| Alkaloid pathway | 156 | 20 | NMT (28) | View species results |
| Flavonoid pathway | 91 | 11 | UFGT (26) | View species results |
| Rosmarinic acid pathway | 68 | 7 | C4H (31) | View species results |
| Steroid pathway | 43 | 13 | CAS (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 841 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 121 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Psubu476100157400 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Psubu478750158870 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Psubu481660164510 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Psubu482230165990 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Psubu482440166720 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| Psubu484090179220 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Psubu484240181880 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Psubu484370183140 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Psubu484670189690 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Psubu484770191890 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| Psubu484870194270 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Psubu484970196450 | Alkaloid | NMT | low | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Psubu484970196460 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| Psubu485830211450 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Psubu485880211660 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Psubu486090215820 | Alkaloid | NMT | low | borderline | NMT__00020__sp_O23372_ATXR3_ARATH |
| Psubu486110216700 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Psubu487270229070 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| Psubu487270229210 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Psubu487300230300 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Psubu540241770 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Psubu720255130 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| Psubu780257520 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |