PlantSME Plant secondary metabolism enzyme database

Potentilla micrantha (potentilla_micrantha)

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Imported from atlas release summary for Potentilla micrantha.

1413
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.08% Alkaloid pathway 23.21% Phenylpropanoid pathway 19.96% Flavonoid pathway 10.69% Rosmarinic acid pathway 9.62% Steroid pathway 6.44%
Family Distribution
C4H 5.97% C3'H/CYP98A 5.6% BAHD 5.14% UGT 4.83% CYP76 4.0% IFS 3.92% 7DLGT 3.9% POD 3.69%
Other Families 62.95%
More Families (97)
T3O 134 3.55% 4CL 129 3.42% F3H 124 3.29% UFGT 115 3.05% NMT 89 2.36% DWF4/CYP90B1 89 2.36% H6H 78 2.07% STR 75 1.99% CAD 69 1.83% LAC 63 1.67% BR6OX2/CYP85A2 62 1.64% CODM/T6ODM 61 1.62% F3'H/CYP75B 61 1.62% TPS 56 1.49% CAS 51 1.35% CYP90D1 51 1.35% GES 50 1.33% GS 49 1.3% SMT1/SMT2/SMT3 48 1.27% CYP71 46 1.22% TRI/TRII 39 1.03% TAT 39 1.03% IO 38 1.01% CSE 38 1.01% F3'5'H/CYP75A 35 0.93% HCT 33 0.88% IFR 31 0.82% F5H/CYP84A 31 0.82% G8O/G8H 30 0.8% SGD 28 0.74% SLS 27 0.72% T16H 26 0.69% FNS 26 0.69% NCS 22 0.58% PMT 20 0.53% ANR 20 0.53% COMT 20 0.53% COR 19 0.5% CCR 18 0.48% RAS 17 0.45% CPD/CYP90A1 16 0.42% 7DLH 15 0.4% BR6OX1/CYP85A1 15 0.4% 8HGO 14 0.37% ANS/LDOX 14 0.37% DFR 13 0.34% SQE 13 0.34% HMGR 13 0.34% CYP51G1 12 0.32% MPO 11 0.29% ROT3/CYP90C1 11 0.29% CYP719 10 0.27% CNMT 10 0.27% CYP80B1 9 0.24% HPPR 9 0.24% PYKS 8 0.21% GGPPS 8 0.21% FPPS 7 0.19% XMT_MXMT_DXMT 6 0.16% CHS 6 0.16% PAL 6 0.16% AACT 6 0.16% 6OMT_4OMT_SOMT 5 0.13% 16OMT 5 0.13% FLS 5 0.13% CPR 5 0.13% SQS/FDFT1 5 0.13% ISY 4 0.11% DET2 4 0.11% HMGS 4 0.11% MVD 4 0.11% LAMT 3 0.08% CCoAOMT 3 0.08% SMO1/SMO2 3 0.08% MVK 3 0.08% DXS 3 0.08% BBE 2 0.05% CYP80F1 2 0.05% ADC 2 0.05% CHI 2 0.05% HYD1 2 0.05% CMK/IspE 2 0.05% MCT/IspD 2 0.05% HDS/IspG 2 0.05% ODC 1 0.03% TDC 1 0.03% TYDC_DDC 1 0.03% FK 1 0.03% DWF7 1 0.03% DWF1 1 0.03% CPI1 1 0.03% DWF5 1 0.03% DXR 1 0.03% PMK 1 0.03% HDR/IspH 1 0.03% IDI 1 0.03% MDS/IspF 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 425 19 UGT (148) View species results
Alkaloid pathway 328 21 7DLGT (58) View species results
Phenylpropanoid pathway 282 11 POD (112) View species results
Flavonoid pathway 151 12 UFGT (85) View species results
Rosmarinic acid pathway 136 7 C4H (60) View species results
Steroid pathway 91 13 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1455 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
4869_t Flavonoid F3H medium borderline
5556_t Flavonoid F3H medium pass
5626_t Flavonoid F3H medium borderline
6115_t Flavonoid F3H low borderline
633_t Flavonoid F3H low borderline
634_t Flavonoid F3H low borderline
680_t Flavonoid F3H medium borderline
6930_t Flavonoid F3H medium borderline
7335_t Flavonoid F3H low borderline
7336_t Flavonoid F3H medium pass
7341_t Flavonoid F3H low borderline
7343_t Flavonoid F3H low borderline
7344_t Flavonoid F3H low borderline
7345_t Flavonoid F3H low borderline
7346_t Flavonoid F3H low borderline
7468_t Flavonoid F3H medium borderline
7517_t Flavonoid F3H medium borderline
783_t Flavonoid F3H medium borderline
8339_t Flavonoid F3H medium borderline
8504_t Flavonoid F3H medium borderline
9125_t Flavonoid F3H medium borderline
9129_t Flavonoid F3H medium borderline
9130_t Flavonoid F3H medium borderline
939_t Flavonoid F3H medium borderline