Potentilla micrantha (potentilla_micrantha)
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Imported from atlas release summary for Potentilla micrantha.
1413
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1413
Candidate Genes
C4H
5.97%
C3'H/CYP98A
5.6%
BAHD
5.14%
UGT
4.83%
CYP76
4.0%
IFS
3.92%
7DLGT
3.9%
POD
3.69%
Other Families
62.95%
More Families (97)
T3O
134
3.55%
4CL
129
3.42%
F3H
124
3.29%
UFGT
115
3.05%
NMT
89
2.36%
DWF4/CYP90B1
89
2.36%
H6H
78
2.07%
STR
75
1.99%
CAD
69
1.83%
LAC
63
1.67%
BR6OX2/CYP85A2
62
1.64%
CODM/T6ODM
61
1.62%
F3'H/CYP75B
61
1.62%
TPS
56
1.49%
CAS
51
1.35%
CYP90D1
51
1.35%
GES
50
1.33%
GS
49
1.3%
SMT1/SMT2/SMT3
48
1.27%
CYP71
46
1.22%
TRI/TRII
39
1.03%
TAT
39
1.03%
IO
38
1.01%
CSE
38
1.01%
F3'5'H/CYP75A
35
0.93%
HCT
33
0.88%
IFR
31
0.82%
F5H/CYP84A
31
0.82%
G8O/G8H
30
0.8%
SGD
28
0.74%
SLS
27
0.72%
T16H
26
0.69%
FNS
26
0.69%
NCS
22
0.58%
PMT
20
0.53%
ANR
20
0.53%
COMT
20
0.53%
COR
19
0.5%
CCR
18
0.48%
RAS
17
0.45%
CPD/CYP90A1
16
0.42%
7DLH
15
0.4%
BR6OX1/CYP85A1
15
0.4%
8HGO
14
0.37%
ANS/LDOX
14
0.37%
DFR
13
0.34%
SQE
13
0.34%
HMGR
13
0.34%
CYP51G1
12
0.32%
MPO
11
0.29%
ROT3/CYP90C1
11
0.29%
CYP719
10
0.27%
CNMT
10
0.27%
CYP80B1
9
0.24%
HPPR
9
0.24%
PYKS
8
0.21%
GGPPS
8
0.21%
FPPS
7
0.19%
XMT_MXMT_DXMT
6
0.16%
CHS
6
0.16%
PAL
6
0.16%
AACT
6
0.16%
6OMT_4OMT_SOMT
5
0.13%
16OMT
5
0.13%
FLS
5
0.13%
CPR
5
0.13%
SQS/FDFT1
5
0.13%
ISY
4
0.11%
DET2
4
0.11%
HMGS
4
0.11%
MVD
4
0.11%
LAMT
3
0.08%
CCoAOMT
3
0.08%
SMO1/SMO2
3
0.08%
MVK
3
0.08%
DXS
3
0.08%
BBE
2
0.05%
CYP80F1
2
0.05%
ADC
2
0.05%
CHI
2
0.05%
HYD1
2
0.05%
CMK/IspE
2
0.05%
MCT/IspD
2
0.05%
HDS/IspG
2
0.05%
ODC
1
0.03%
TDC
1
0.03%
TYDC_DDC
1
0.03%
FK
1
0.03%
DWF7
1
0.03%
DWF1
1
0.03%
CPI1
1
0.03%
DWF5
1
0.03%
DXR
1
0.03%
PMK
1
0.03%
HDR/IspH
1
0.03%
IDI
1
0.03%
MDS/IspF
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 425 | 19 | UGT (148) | View species results |
| Alkaloid pathway | 328 | 21 | 7DLGT (58) | View species results |
| Phenylpropanoid pathway | 282 | 11 | POD (112) | View species results |
| Flavonoid pathway | 151 | 12 | UFGT (85) | View species results |
| Rosmarinic acid pathway | 136 | 7 | C4H (60) | View species results |
| Steroid pathway | 91 | 13 | CAS (37) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1455 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 244 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| 33175_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 33179_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 33361_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 4350_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 4352_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 4769_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 5369_t | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| 5370_t | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| 5838_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 6401_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 6568_t | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| 6572_t | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| 6595_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 711_t | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| 7363_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 7364_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 7365_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 7832_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 7912_t | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| 8259_t | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| 8648_t | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| 9590_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 9959_t | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| 996_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| 999_t | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |