Protea cynaroides (protea_cynaroides)
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Imported from atlas release summary for Protea cynaroides.
1755
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1755
Candidate Genes
C4H
5.68%
UGT
5.41%
BAHD
5.36%
C3'H/CYP98A
4.99%
7DLGT
4.81%
UFGT
4.2%
4CL
4.15%
POD
3.78%
Other Families
61.63%
More Families (97)
CYP76
139
3.43%
IFS
131
3.23%
F3H
110
2.72%
CAD
97
2.4%
T3O
88
2.17%
NMT
87
2.15%
DWF4/CYP90B1
86
2.12%
F3'H/CYP75B
75
1.85%
BR6OX2/CYP85A2
68
1.68%
CODM/T6ODM
60
1.48%
CAS
55
1.36%
CSE
52
1.28%
GES
51
1.26%
H6H
51
1.26%
TPS
51
1.26%
STR
49
1.21%
G8O/G8H
48
1.19%
COMT
48
1.19%
SMT1/SMT2/SMT3
47
1.16%
HCT
45
1.11%
PYKS
44
1.09%
GS
44
1.09%
SGD
41
1.01%
LAC
41
1.01%
TRI/TRII
37
0.91%
RAS
37
0.91%
IFR
35
0.86%
SLS
34
0.84%
IO
32
0.79%
PMT
29
0.72%
ANR
29
0.72%
8HGO
27
0.67%
CYP71
27
0.67%
LAMT
26
0.64%
CCR
26
0.64%
CYP90D1
26
0.64%
7DLH
25
0.62%
CHS
24
0.59%
COR
23
0.57%
T16H
23
0.57%
16OMT
23
0.57%
F3'5'H/CYP75A
23
0.57%
BBE
20
0.49%
FNS
20
0.49%
F5H/CYP84A
19
0.47%
TAT
19
0.47%
BR6OX1/CYP85A1
17
0.42%
CYP719
15
0.37%
NCS
15
0.37%
PAL
15
0.37%
DFR
15
0.37%
FPPS
14
0.35%
CCoAOMT
13
0.32%
HPPR
11
0.27%
CPD/CYP90A1
11
0.27%
MPO
10
0.25%
CNMT
9
0.22%
CPR
9
0.22%
ROT3/CYP90C1
8
0.2%
DXS
8
0.2%
TYDC_DDC
7
0.17%
CYP80B1
7
0.17%
CYP51G1
7
0.17%
GGPPS
7
0.17%
XMT_MXMT_DXMT
6
0.15%
ISY
6
0.15%
ANS/LDOX
6
0.15%
SQS/FDFT1
6
0.15%
AACT
6
0.15%
TDC
5
0.12%
MCT/IspD
5
0.12%
MVD
5
0.12%
HDR/IspH
5
0.12%
ADC
4
0.1%
CHI
4
0.1%
DET2
4
0.1%
SMO1/SMO2
4
0.1%
MVK
4
0.1%
6OMT_4OMT_SOMT
3
0.07%
SQE
3
0.07%
DWF7
3
0.07%
MDS/IspF
3
0.07%
DXR
3
0.07%
HMGR
3
0.07%
CYP80F1
2
0.05%
FLS
2
0.05%
FK
2
0.05%
HMGS
2
0.05%
HDS/IspG
2
0.05%
ODC
1
0.02%
HYD1
1
0.02%
DWF1
1
0.02%
DWF5
1
0.02%
CPI1
1
0.02%
PMK
1
0.02%
IDI
1
0.02%
CMK/IspE
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 510 | 19 | UGT (205) | View species results |
| Alkaloid pathway | 396 | 22 | 7DLGT (91) | View species results |
| Phenylpropanoid pathway | 394 | 13 | POD (141) | View species results |
| Flavonoid pathway | 249 | 11 | UFGT (153) | View species results |
| Rosmarinic acid pathway | 115 | 7 | 4CL (37) | View species results |
| Steroid pathway | 91 | 12 | CAS (47) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1343 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 299 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| protea_cynaroides_KAJ4950358.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| protea_cynaroides_KAJ4950682.1 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| protea_cynaroides_KAJ4951092.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| protea_cynaroides_KAJ4952030.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| protea_cynaroides_KAJ4952450.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| protea_cynaroides_KAJ4952554.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4952645.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| protea_cynaroides_KAJ4953619.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| protea_cynaroides_KAJ4953714.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4954063.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| protea_cynaroides_KAJ4954597.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| protea_cynaroides_KAJ4954834.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| protea_cynaroides_KAJ4954964.1 | Alkaloid | NMT | low | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| protea_cynaroides_KAJ4955150.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| protea_cynaroides_KAJ4955209.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| protea_cynaroides_KAJ4955301.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| protea_cynaroides_KAJ4955821.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| protea_cynaroides_KAJ4956241.1 | Alkaloid | NMT | low | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4956721.1 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| protea_cynaroides_KAJ4957240.1 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| protea_cynaroides_KAJ4957947.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| protea_cynaroides_KAJ4958017.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4958252.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4958278.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4958360.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| protea_cynaroides_KAJ4958380.1 | Alkaloid | NMT | low | borderline | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| protea_cynaroides_KAJ4958628.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| protea_cynaroides_KAJ4959070.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| protea_cynaroides_KAJ4959236.1 | Alkaloid | NMT | medium | borderline | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| protea_cynaroides_KAJ4959634.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| protea_cynaroides_KAJ4961019.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4961997.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4962456.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| protea_cynaroides_KAJ4962974.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| protea_cynaroides_KAJ4963447.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| protea_cynaroides_KAJ4965125.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4965391.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4965611.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| protea_cynaroides_KAJ4966011.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| protea_cynaroides_KAJ4966041.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| protea_cynaroides_KAJ4966087.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| protea_cynaroides_KAJ4966237.1 | Alkaloid | NMT | medium | borderline | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| protea_cynaroides_KAJ4966302.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4966547.1 | Alkaloid | NMT | medium | borderline | NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB |
| protea_cynaroides_KAJ4966706.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| protea_cynaroides_KAJ4966844.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| protea_cynaroides_KAJ4966872.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| protea_cynaroides_KAJ4967135.1 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| protea_cynaroides_KAJ4967235.1 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| protea_cynaroides_KAJ4967635.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |