Protea cynaroides (protea_cynaroides)
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Imported from atlas release summary for Protea cynaroides.
1755
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1755
Candidate Genes
C4H
5.68%
UGT
5.41%
BAHD
5.36%
C3'H/CYP98A
4.99%
7DLGT
4.81%
UFGT
4.2%
4CL
4.15%
POD
3.78%
Other Families
61.63%
More Families (97)
CYP76
139
3.43%
IFS
131
3.23%
F3H
110
2.72%
CAD
97
2.4%
T3O
88
2.17%
NMT
87
2.15%
DWF4/CYP90B1
86
2.12%
F3'H/CYP75B
75
1.85%
BR6OX2/CYP85A2
68
1.68%
CODM/T6ODM
60
1.48%
CAS
55
1.36%
CSE
52
1.28%
GES
51
1.26%
H6H
51
1.26%
TPS
51
1.26%
STR
49
1.21%
G8O/G8H
48
1.19%
COMT
48
1.19%
SMT1/SMT2/SMT3
47
1.16%
HCT
45
1.11%
PYKS
44
1.09%
GS
44
1.09%
SGD
41
1.01%
LAC
41
1.01%
TRI/TRII
37
0.91%
RAS
37
0.91%
IFR
35
0.86%
SLS
34
0.84%
IO
32
0.79%
PMT
29
0.72%
ANR
29
0.72%
8HGO
27
0.67%
CYP71
27
0.67%
LAMT
26
0.64%
CCR
26
0.64%
CYP90D1
26
0.64%
7DLH
25
0.62%
CHS
24
0.59%
COR
23
0.57%
T16H
23
0.57%
16OMT
23
0.57%
F3'5'H/CYP75A
23
0.57%
BBE
20
0.49%
FNS
20
0.49%
F5H/CYP84A
19
0.47%
TAT
19
0.47%
BR6OX1/CYP85A1
17
0.42%
CYP719
15
0.37%
NCS
15
0.37%
PAL
15
0.37%
DFR
15
0.37%
FPPS
14
0.35%
CCoAOMT
13
0.32%
HPPR
11
0.27%
CPD/CYP90A1
11
0.27%
MPO
10
0.25%
CNMT
9
0.22%
CPR
9
0.22%
ROT3/CYP90C1
8
0.2%
DXS
8
0.2%
TYDC_DDC
7
0.17%
CYP80B1
7
0.17%
CYP51G1
7
0.17%
GGPPS
7
0.17%
XMT_MXMT_DXMT
6
0.15%
ISY
6
0.15%
ANS/LDOX
6
0.15%
SQS/FDFT1
6
0.15%
AACT
6
0.15%
TDC
5
0.12%
MCT/IspD
5
0.12%
MVD
5
0.12%
HDR/IspH
5
0.12%
ADC
4
0.1%
CHI
4
0.1%
DET2
4
0.1%
SMO1/SMO2
4
0.1%
MVK
4
0.1%
6OMT_4OMT_SOMT
3
0.07%
SQE
3
0.07%
DWF7
3
0.07%
MDS/IspF
3
0.07%
DXR
3
0.07%
HMGR
3
0.07%
CYP80F1
2
0.05%
FLS
2
0.05%
FK
2
0.05%
HMGS
2
0.05%
HDS/IspG
2
0.05%
ODC
1
0.02%
HYD1
1
0.02%
DWF1
1
0.02%
DWF5
1
0.02%
CPI1
1
0.02%
PMK
1
0.02%
IDI
1
0.02%
CMK/IspE
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 510 | 19 | UGT (205) | View species results |
| Alkaloid pathway | 396 | 22 | 7DLGT (91) | View species results |
| Phenylpropanoid pathway | 394 | 13 | POD (141) | View species results |
| Flavonoid pathway | 249 | 11 | UFGT (153) | View species results |
| Rosmarinic acid pathway | 115 | 7 | 4CL (37) | View species results |
| Steroid pathway | 91 | 12 | CAS (47) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1343 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 299 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| protea_cynaroides_KAJ4967761.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| protea_cynaroides_KAJ4967888.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| protea_cynaroides_KAJ4967946.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| protea_cynaroides_KAJ4968582.1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| protea_cynaroides_KAJ4968802.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| protea_cynaroides_KAJ4968968.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| protea_cynaroides_KAJ4969996.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| protea_cynaroides_KAJ4970348.1 | Alkaloid | NMT | low | borderline | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| protea_cynaroides_KAJ4971294.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| protea_cynaroides_KAJ4971599.1 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| protea_cynaroides_KAJ4971727.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| protea_cynaroides_KAJ4971738.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| protea_cynaroides_KAJ4972224.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| protea_cynaroides_KAJ4972955.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| protea_cynaroides_KAJ4973023.1 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| protea_cynaroides_KAJ4973038.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| protea_cynaroides_KAJ4973395.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4973747.1 | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| protea_cynaroides_KAJ4973893.1 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| protea_cynaroides_KAJ4974632.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4974850.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| protea_cynaroides_KAJ4975134.1 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| protea_cynaroides_KAJ4975470.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| protea_cynaroides_KAJ4975751.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| protea_cynaroides_KAJ4975809.1 | Alkaloid | NMT | low | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| protea_cynaroides_KAJ4976164.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| protea_cynaroides_KAJ4976376.1 | Alkaloid | NMT | medium | borderline | NMT__00010__sp_A4GE70_DXMT1_COFCA |
| protea_cynaroides_KAJ4976478.1 | Alkaloid | NMT | low | borderline | NMT__00020__sp_O23372_ATXR3_ARATH |
| protea_cynaroides_KAJ4977457.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| protea_cynaroides_KAJ4977476.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| protea_cynaroides_KAJ4978935.1 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| protea_cynaroides_KAJ4979324.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| protea_cynaroides_KAJ4980497.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| protea_cynaroides_KAJ4980712.1 | Alkaloid | NMT | medium | borderline | NMT__00064__sp_Q9SEH5_PMT3_TOBAC |
| protea_cynaroides_KAJ4980783.1 | Alkaloid | NMT | low | borderline | NMT__00019__sp_O22781_SUVH2_ARATH |
| protea_cynaroides_KAJ4981877.1 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| protea_cynaroides_KAJ4982295.1 | Alkaloid | NMT | low | borderline | NMT__00045__sp_Q8VYX1_PEAM1_WHEAT |