Protea cynaroides (protea_cynaroides)
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Imported from atlas release summary for Protea cynaroides.
1755
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1755
Candidate Genes
C4H
5.68%
UGT
5.41%
BAHD
5.36%
C3'H/CYP98A
4.99%
7DLGT
4.81%
UFGT
4.2%
4CL
4.15%
POD
3.78%
Other Families
61.63%
More Families (97)
CYP76
139
3.43%
IFS
131
3.23%
F3H
110
2.72%
CAD
97
2.4%
T3O
88
2.17%
NMT
87
2.15%
DWF4/CYP90B1
86
2.12%
F3'H/CYP75B
75
1.85%
BR6OX2/CYP85A2
68
1.68%
CODM/T6ODM
60
1.48%
CAS
55
1.36%
CSE
52
1.28%
GES
51
1.26%
H6H
51
1.26%
TPS
51
1.26%
STR
49
1.21%
G8O/G8H
48
1.19%
COMT
48
1.19%
SMT1/SMT2/SMT3
47
1.16%
HCT
45
1.11%
PYKS
44
1.09%
GS
44
1.09%
SGD
41
1.01%
LAC
41
1.01%
TRI/TRII
37
0.91%
RAS
37
0.91%
IFR
35
0.86%
SLS
34
0.84%
IO
32
0.79%
PMT
29
0.72%
ANR
29
0.72%
8HGO
27
0.67%
CYP71
27
0.67%
LAMT
26
0.64%
CCR
26
0.64%
CYP90D1
26
0.64%
7DLH
25
0.62%
CHS
24
0.59%
COR
23
0.57%
T16H
23
0.57%
16OMT
23
0.57%
F3'5'H/CYP75A
23
0.57%
BBE
20
0.49%
FNS
20
0.49%
F5H/CYP84A
19
0.47%
TAT
19
0.47%
BR6OX1/CYP85A1
17
0.42%
CYP719
15
0.37%
NCS
15
0.37%
PAL
15
0.37%
DFR
15
0.37%
FPPS
14
0.35%
CCoAOMT
13
0.32%
HPPR
11
0.27%
CPD/CYP90A1
11
0.27%
MPO
10
0.25%
CNMT
9
0.22%
CPR
9
0.22%
ROT3/CYP90C1
8
0.2%
DXS
8
0.2%
TYDC_DDC
7
0.17%
CYP80B1
7
0.17%
CYP51G1
7
0.17%
GGPPS
7
0.17%
XMT_MXMT_DXMT
6
0.15%
ISY
6
0.15%
ANS/LDOX
6
0.15%
SQS/FDFT1
6
0.15%
AACT
6
0.15%
TDC
5
0.12%
MCT/IspD
5
0.12%
MVD
5
0.12%
HDR/IspH
5
0.12%
ADC
4
0.1%
CHI
4
0.1%
DET2
4
0.1%
SMO1/SMO2
4
0.1%
MVK
4
0.1%
6OMT_4OMT_SOMT
3
0.07%
SQE
3
0.07%
DWF7
3
0.07%
MDS/IspF
3
0.07%
DXR
3
0.07%
HMGR
3
0.07%
CYP80F1
2
0.05%
FLS
2
0.05%
FK
2
0.05%
HMGS
2
0.05%
HDS/IspG
2
0.05%
ODC
1
0.02%
HYD1
1
0.02%
DWF1
1
0.02%
DWF5
1
0.02%
CPI1
1
0.02%
PMK
1
0.02%
IDI
1
0.02%
CMK/IspE
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 510 | 19 | UGT (205) | View species results |
| Alkaloid pathway | 396 | 22 | 7DLGT (91) | View species results |
| Phenylpropanoid pathway | 394 | 13 | POD (141) | View species results |
| Flavonoid pathway | 249 | 11 | UFGT (153) | View species results |
| Rosmarinic acid pathway | 115 | 7 | 4CL (37) | View species results |
| Steroid pathway | 91 | 12 | CAS (47) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1343 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 299 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| protea_cynaroides_KAJ4954225.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| protea_cynaroides_KAJ4954248.1 | Terpenoid | BAHD | medium | pass | BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC |
| protea_cynaroides_KAJ4954616.1 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| protea_cynaroides_KAJ4955020.1 | Terpenoid | BAHD | low | borderline | BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ |
| protea_cynaroides_KAJ4955566.1 | Terpenoid | BAHD | low | borderline | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| protea_cynaroides_KAJ4955773.1 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| protea_cynaroides_KAJ4955829.1 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| protea_cynaroides_KAJ4955977.1 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| protea_cynaroides_KAJ4956044.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| protea_cynaroides_KAJ4956244.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| protea_cynaroides_KAJ4956565.1 | Terpenoid | BAHD | medium | pass | BAHD__00041__sp_Q4VCM1_LCAT2_ARATH |
| protea_cynaroides_KAJ4956573.1 | Terpenoid | BAHD | medium | pass | BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC |
| protea_cynaroides_KAJ4956750.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| protea_cynaroides_KAJ4956845.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| protea_cynaroides_KAJ4956873.1 | Terpenoid | BAHD | low | borderline | BAHD__00052__sp_Q8GWG0_GPAT9_ARATH |
| protea_cynaroides_KAJ4956909.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| protea_cynaroides_KAJ4956970.1 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| protea_cynaroides_KAJ4957054.1 | Terpenoid | BAHD | medium | pass | BAHD__00084__sp_Q9M115_ZDH16_ARATH |
| protea_cynaroides_KAJ4957357.1 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| protea_cynaroides_KAJ4957589.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| protea_cynaroides_KAJ4957734.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| protea_cynaroides_KAJ4957767.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| protea_cynaroides_KAJ4957768.1 | Terpenoid | BAHD | medium | pass | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| protea_cynaroides_KAJ4957770.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| protea_cynaroides_KAJ4957836.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| protea_cynaroides_KAJ4957965.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| protea_cynaroides_KAJ4958049.1 | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| protea_cynaroides_KAJ4958052.1 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| protea_cynaroides_KAJ4958323.1 | Terpenoid | BAHD | medium | pass | BAHD__00092__sp_Q9SU91_LPXA_ARATH |
| protea_cynaroides_KAJ4958405.1 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| protea_cynaroides_KAJ4958412.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| protea_cynaroides_KAJ4958430.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| protea_cynaroides_KAJ4958443.1 | Terpenoid | BAHD | low | borderline | BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN |
| protea_cynaroides_KAJ4958608.1 | Terpenoid | BAHD | low | borderline | BAHD__00083__sp_Q9LMM0_GPAT4_ARATH |
| protea_cynaroides_KAJ4958640.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| protea_cynaroides_KAJ4958728.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| protea_cynaroides_KAJ4958874.1 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| protea_cynaroides_KAJ4958896.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| protea_cynaroides_KAJ4958939.1 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| protea_cynaroides_KAJ4958975.1 | Terpenoid | BAHD | medium | pass | BAHD__00075__sp_Q9FJB4_GPC1_ARATH |
| protea_cynaroides_KAJ4959205.1 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| protea_cynaroides_KAJ4959856.1 | Terpenoid | BAHD | low | borderline | BAHD__00002__sp_A0A068BIF1_AT9_ACTER |
| protea_cynaroides_KAJ4960063.1 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| protea_cynaroides_KAJ4960081.1 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| protea_cynaroides_KAJ4960146.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| protea_cynaroides_KAJ4960659.1 | Terpenoid | BAHD | medium | pass | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| protea_cynaroides_KAJ4960719.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| protea_cynaroides_KAJ4960956.1 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| protea_cynaroides_KAJ4961757.1 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| protea_cynaroides_KAJ4961996.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |