Prunus mandshurica (prunus_mandshurica)
Imported from atlas release summary for Prunus mandshurica.
1951
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1951
Candidate Genes
C4H
6.58%
C3'H/CYP98A
5.83%
BAHD
5.43%
UGT
5.06%
7DLGT
4.47%
UFGT
4.43%
CYP76
4.06%
IFS
3.79%
Other Families
60.36%
More Families (97)
T3O
161
3.35%
4CL
159
3.31%
F3H
132
2.75%
POD
124
2.58%
CAD
121
2.52%
DWF4/CYP90B1
106
2.21%
F3'H/CYP75B
81
1.69%
GS
79
1.64%
H6H
77
1.6%
STR
77
1.6%
TPS
74
1.54%
NMT
70
1.46%
BR6OX2/CYP85A2
70
1.46%
CODM/T6ODM
69
1.44%
GES
68
1.41%
CAS
63
1.31%
SGD
61
1.27%
TAT
54
1.12%
CYP90D1
52
1.08%
IFR
49
1.02%
LAC
48
1.0%
CYP71
48
1.0%
TRI/TRII
46
0.96%
SMT1/SMT2/SMT3
46
0.96%
CSE
45
0.94%
BBE
41
0.85%
COMT
40
0.83%
T16H
39
0.81%
HCT
38
0.79%
FNS
36
0.75%
G8O/G8H
35
0.73%
BR6OX1/CYP85A1
35
0.73%
F3'5'H/CYP75A
34
0.71%
16OMT
32
0.67%
IO
31
0.65%
ANR
30
0.62%
RAS
29
0.6%
7DLH
28
0.58%
F5H/CYP84A
28
0.58%
PMT
25
0.52%
LAMT
25
0.52%
SLS
24
0.5%
PYKS
23
0.48%
NCS
23
0.48%
CCR
23
0.48%
ROT3/CYP90C1
22
0.46%
CPD/CYP90A1
19
0.4%
COR
16
0.33%
8HGO
15
0.31%
DFR
12
0.25%
CYP51G1
12
0.25%
CYP719
11
0.23%
TYDC_DDC
10
0.21%
ISY
10
0.21%
CCoAOMT
10
0.21%
HPPR
10
0.21%
MPO
9
0.19%
PAL
9
0.19%
CNMT
8
0.17%
ANS/LDOX
8
0.17%
CHS
8
0.17%
SQS/FDFT1
8
0.17%
SQE
7
0.15%
MVD
7
0.15%
CYP80B1
6
0.12%
DET2
5
0.1%
MVK
5
0.1%
GGPPS
5
0.1%
TDC
4
0.08%
CHI
4
0.08%
FLS
4
0.08%
DWF1
4
0.08%
SMO1/SMO2
4
0.08%
DXS
4
0.08%
HDR/IspH
4
0.08%
AACT
4
0.08%
FPPS
4
0.08%
HMGR
4
0.08%
6OMT_4OMT_SOMT
3
0.06%
ODC
3
0.06%
CPR
3
0.06%
DWF7
3
0.06%
FK
2
0.04%
MCT/IspD
2
0.04%
DXR
2
0.04%
XMT_MXMT_DXMT
1
0.02%
ADC
1
0.02%
HYD1
1
0.02%
DWF5
1
0.02%
CPI1
1
0.02%
GPPS
1
0.02%
CMK/IspE
1
0.02%
PMK
1
0.02%
HMGS
1
0.02%
MDS/IspF
1
0.02%
HDS/IspG
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 597 | 18 | UGT (231) | View species results |
| Alkaloid pathway | 446 | 22 | 7DLGT (120) | View species results |
| Phenylpropanoid pathway | 347 | 11 | POD (118) | View species results |
| Flavonoid pathway | 265 | 11 | UFGT (193) | View species results |
| Rosmarinic acid pathway | 188 | 7 | C4H (83) | View species results |
| Steroid pathway | 108 | 14 | CAS (52) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1815 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 328 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pruma.6G136500.t1.p1_1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Pruma.6G496400.t1.p1_1 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Pruma.7G038600.t1.p1_1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Pruma.7G070700.t1.p1_1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Pruma.7G070700.t2.p1_1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Pruma.7G237400.t1.p1_1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Pruma.7G242900.t1.p1_1 | Alkaloid | NMT | medium | pass | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| Pruma.7G243300.t1.p1_1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Pruma.7G251900.t1.p1_1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| Pruma.7G270600.t1.p1_1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Pruma.7G293800.t1.p1_1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Pruma.7G293800.t2.p1_1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Pruma.7G297700.t2.p1_1 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Pruma.7G310700.t1.p1_1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Pruma.7G340600.t1.p1_1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Pruma.7G361800.t1.p1_1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Pruma.7G396400.t1.p1_1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Pruma.8G065700.t1.p1_1 | Alkaloid | NMT | low | borderline | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| Pruma.8G339500.t1.p1_1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Pruma.8G395800.t1.p1_1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |