Prunus mume (prunus_mume)
Imported from atlas release summary for Prunus mume.
1980
Candidate Protein Records
1786
Pathway-Level Records
4079
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4079
Family-Level Calls
BAHD
6.03%
C4H
5.83%
C3'H/CYP98A
5.49%
UGT
4.58%
UFGT
4.54%
7DLGT
4.49%
IFS
3.75%
4CL
3.53%
Other Families
61.76%
More Families (95)
POD
142
3.48%
T3O
134
3.29%
F3H
131
3.21%
CYP76
129
3.16%
DWF4/CYP90B1
93
2.28%
SGD
92
2.26%
CAD
90
2.21%
NMT
83
2.03%
STR
73
1.79%
CODM/T6ODM
72
1.77%
H6H
63
1.54%
BR6OX2/CYP85A2
60
1.47%
GS
59
1.45%
TRI/TRII
59
1.45%
F3'H/CYP75B
59
1.45%
SMT1/SMT2/SMT3
52
1.27%
TAT
49
1.2%
HCT
47
1.15%
CAS
46
1.13%
LAC
44
1.08%
CYP71
43
1.05%
7DLH
39
0.96%
CSE
37
0.91%
CYP90D1
37
0.91%
IFR
36
0.88%
ANR
34
0.83%
COMT
34
0.83%
RAS
34
0.83%
TPS
34
0.83%
BBE
33
0.81%
GES
33
0.81%
PYKS
30
0.74%
PMT
28
0.69%
16OMT
27
0.66%
BR6OX1/CYP85A1
27
0.66%
T16H
25
0.61%
NCS
23
0.56%
SLS
22
0.54%
CCR
22
0.54%
IO
20
0.49%
LAMT
19
0.47%
FNS
19
0.47%
8HGO
15
0.37%
DFR
15
0.37%
F3'5'H/CYP75A
14
0.34%
F5H/CYP84A
14
0.34%
CPD/CYP90A1
14
0.34%
COR
12
0.29%
CNMT
10
0.25%
CYP51G1
10
0.25%
ISY
9
0.22%
CCoAOMT
9
0.22%
ROT3/CYP90C1
9
0.22%
FPPS
8
0.2%
G8O/G8H
7
0.17%
CYP719
7
0.17%
CHS
7
0.17%
HPPR
7
0.17%
AACT
7
0.17%
TYDC_DDC
6
0.15%
ANS/LDOX
6
0.15%
PAL
6
0.15%
SQS/FDFT1
6
0.15%
SMO1/SMO2
6
0.15%
MPO
5
0.12%
CPR
5
0.12%
DXS
5
0.12%
GGPPS
5
0.12%
MVD
5
0.12%
CHI
4
0.1%
DWF1
4
0.1%
SQE
4
0.1%
DET2
4
0.1%
MCT/IspD
4
0.1%
HMGR
4
0.1%
CYP80B1
3
0.07%
HDS/IspG
3
0.07%
HDR/IspH
3
0.07%
TDC
2
0.05%
6OMT_4OMT_SOMT
2
0.05%
FK
2
0.05%
CPI1
2
0.05%
MVK
2
0.05%
HMGS
2
0.05%
DXR
2
0.05%
ODC
1
0.02%
ADC
1
0.02%
FLS
1
0.02%
DWF5
1
0.02%
DWF7
1
0.02%
HYD1
1
0.02%
IDI
1
0.02%
CMK/IspE
1
0.02%
MDS/IspF
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 514 | 19 | BAHD (211) | View species results |
| Alkaloid pathway | 414 | 22 | 7DLGT (107) | View species results |
| Phenylpropanoid pathway | 352 | 11 | POD (141) | View species results |
| Flavonoid pathway | 241 | 10 | UFGT (180) | View species results |
| Rosmarinic acid pathway | 166 | 7 | C4H (57) | View species results |
| Steroid pathway | 99 | 12 | SMT1/SMT2/SMT3 (40) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1381 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 327 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| XP_008236346.2 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_008236498.2 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_008237677.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| XP_008237699.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_008239549.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_008240152.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| XP_008240683.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| XP_008243007.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_008243035.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_008243225.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_008243365.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| XP_016646802.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| XP_016650433.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_016650583.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_016650584.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_016650585.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_016650688.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_016651021.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_016651906.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| XP_008220536.1 | Steroid | SQE | medium | pass |
| XP_008236165.2 | Steroid | SQE | medium | pass |
| XP_008236166.1 | Steroid | SQE | medium | pass |
| XP_008237426.1 | Steroid | SQE | medium | pass |
| NP_001280188.1 | Steroid | SQS/FDFT1 | medium | pass |
| XP_008227888.1 | Steroid | SQS/FDFT1 | medium | pass |
| XP_008229581.1 | Steroid | SQS/FDFT1 | medium | pass |
| XP_008236983.1 | Steroid | SQS/FDFT1 | high | pass |
| XP_008238626.1 | Steroid | SQS/FDFT1 | low | borderline |
| XP_008238794.1 | Steroid | SQS/FDFT1 | medium | pass |