Prunus yedoensis (prunus_yedoensis)
Imported from atlas release summary for Prunus yedoensis.
4086
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
4086
Candidate Genes
BAHD
6.02%
C4H
6.01%
C3'H/CYP98A
5.08%
UGT
4.87%
7DLGT
3.97%
UFGT
3.84%
CYP76
3.59%
IFS
3.32%
Other Families
63.29%
More Families (97)
4CL
288
3.03%
F3H
278
2.93%
POD
256
2.69%
T3O
255
2.68%
SGD
207
2.18%
DWF4/CYP90B1
205
2.16%
CAD
180
1.89%
F3'H/CYP75B
175
1.84%
NMT
172
1.81%
H6H
170
1.79%
STR
164
1.73%
TPS
155
1.63%
CODM/T6ODM
150
1.58%
GES
142
1.49%
LAC
139
1.46%
CAS
137
1.44%
BR6OX2/CYP85A2
120
1.26%
CYP71
120
1.26%
HCT
114
1.2%
TAT
111
1.17%
CYP90D1
107
1.13%
TRI/TRII
98
1.03%
IFR
97
1.02%
CSE
96
1.01%
SMT1/SMT2/SMT3
94
0.99%
7DLH
91
0.96%
BBE
86
0.91%
T16H
84
0.88%
COMT
84
0.88%
GS
78
0.82%
IO
77
0.81%
G8O/G8H
77
0.81%
PMT
76
0.8%
RAS
75
0.79%
FNS
69
0.73%
PYKS
62
0.65%
16OMT
59
0.62%
BR6OX1/CYP85A1
54
0.57%
NCS
53
0.56%
CCR
53
0.56%
ANR
52
0.55%
8HGO
51
0.54%
F3'5'H/CYP75A
51
0.54%
F5H/CYP84A
51
0.54%
LAMT
45
0.47%
COR
44
0.46%
SLS
39
0.41%
PAL
39
0.41%
CPD/CYP90A1
35
0.37%
DFR
32
0.34%
ROT3/CYP90C1
32
0.34%
ANS/LDOX
28
0.29%
CHS
25
0.26%
CYP51G1
24
0.25%
AACT
24
0.25%
FPPS
19
0.2%
CNMT
17
0.18%
GGPPS
16
0.17%
SQS/FDFT1
15
0.16%
MVD
15
0.16%
MPO
14
0.15%
ISY
13
0.14%
CYP719
13
0.14%
HMGR
13
0.14%
CYP80B1
12
0.13%
HDR/IspH
12
0.13%
FLS
11
0.12%
CCoAOMT
11
0.12%
CPR
11
0.12%
TDC
10
0.11%
TYDC_DDC
10
0.11%
SQE
10
0.11%
XMT_MXMT_DXMT
9
0.09%
DET2
9
0.09%
DXS
8
0.08%
ODC
7
0.07%
CHI
7
0.07%
HPPR
7
0.07%
MVK
7
0.07%
6OMT_4OMT_SOMT
6
0.06%
DWF1
5
0.05%
SMO1/SMO2
5
0.05%
PMK
5
0.05%
DWF7
4
0.04%
FK
4
0.04%
HMGS
4
0.04%
MCT/IspD
4
0.04%
CPI1
3
0.03%
CMK/IspE
3
0.03%
HDS/IspG
3
0.03%
ADC
2
0.02%
DWF5
2
0.02%
MDS/IspF
2
0.02%
DXR
2
0.02%
CYP80F1
1
0.01%
HYD1
1
0.01%
IDI
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1237 | 21 | BAHD (464) | View species results |
| Alkaloid pathway | 996 | 24 | 7DLGT (192) | View species results |
| Phenylpropanoid pathway | 750 | 12 | POD (221) | View species results |
| Flavonoid pathway | 509 | 13 | UFGT (307) | View species results |
| Rosmarinic acid pathway | 370 | 7 | C4H (125) | View species results |
| Steroid pathway | 224 | 14 | CAS (116) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3333 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 761 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| prunus_yedoensis_CYE_r3.1SPE0_g097730.1 | Alkaloid | NMT | medium | borderline | NMT__00001__sp_A0A075D654_ANMT_RAUSE |
| prunus_yedoensis_CYE_r3.1SPE0_g100370.1 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g109770.1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| prunus_yedoensis_CYE_r3.1SPE0_g114430.1 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g114440.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g114450.1 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g118130.1 | Alkaloid | NMT | medium | borderline | NMT__00065__sp_Q9SEH7_PMT2_TOBAC |
| prunus_yedoensis_CYE_r3.1SPE0_g121260.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g123160.1 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g125820.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g129390.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g142930.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| prunus_yedoensis_CYE_r3.1SPE0_g146290.1 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| prunus_yedoensis_CYE_r3.1SPE0_g146380.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g150110.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g150120.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g162990.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g177110.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| prunus_yedoensis_CYE_r3.1SPE0_g179330.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| prunus_yedoensis_CYE_r3.1SPE1_g002140.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| prunus_yedoensis_CYE_r3.1SPE1_g006380.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| prunus_yedoensis_CYE_r3.1SPE1_g013110.1 | Alkaloid | NMT | low | borderline | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| prunus_yedoensis_CYE_r3.1SPE1_g013240.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| prunus_yedoensis_CYE_r3.1SPE1_g017980.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| prunus_yedoensis_CYE_r3.1SPE1_g020400.1 | Alkaloid | NMT | medium | pass | NMT__00030__sp_Q43088_RBCMT_PEA |
| prunus_yedoensis_CYE_r3.1SPE1_g028730.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| prunus_yedoensis_CYE_r3.1SPE1_g037930.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| prunus_yedoensis_CYE_r3.1SPE1_g039790.1 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| prunus_yedoensis_CYE_r3.1SPE1_g040200.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| prunus_yedoensis_CYE_r3.1SPE1_g041610.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| prunus_yedoensis_CYE_r3.1SPE2_g001850.1 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| prunus_yedoensis_CYE_r3.1SPE2_g001880.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| prunus_yedoensis_CYE_r3.1SPE2_g003310.1 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| prunus_yedoensis_CYE_r3.1SPE2_g003350.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| prunus_yedoensis_CYE_r3.1SPE2_g004150.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| prunus_yedoensis_CYE_r3.1SPE2_g004210.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| prunus_yedoensis_CYE_r3.1SPE2_g004250.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| prunus_yedoensis_CYE_r3.1SPE2_g012450.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| prunus_yedoensis_CYE_r3.1SPE2_g018630.1 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| prunus_yedoensis_CYE_r3.1SPE2_g021970.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| prunus_yedoensis_CYE_r3.1SPE2_g023430.1 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| prunus_yedoensis_CYE_r3.1SPE2_g023470.1 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| prunus_yedoensis_CYE_r3.1SPE2_g029990.1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| prunus_yedoensis_CYE_r3.1SPE2_g034140.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| prunus_yedoensis_CYE_r3.1SPE2_g034430.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| prunus_yedoensis_CYE_r3.1SPE3_g027110.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| prunus_yedoensis_CYE_r3.1SPE3_g027330.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| prunus_yedoensis_CYE_r3.1SPE3_g035480.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| prunus_yedoensis_CYE_r3.1SPE4_g007620.1 | Alkaloid | NMT | low | borderline | NMT__00045__sp_Q8VYX1_PEAM1_WHEAT |
| prunus_yedoensis_CYE_r3.1SPE4_g012650.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |