Prunus yedoensis (prunus_yedoensis)
Imported from atlas release summary for Prunus yedoensis.
4086
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
4086
Candidate Genes
BAHD
6.02%
C4H
6.01%
C3'H/CYP98A
5.08%
UGT
4.87%
7DLGT
3.97%
UFGT
3.84%
CYP76
3.59%
IFS
3.32%
Other Families
63.29%
More Families (97)
4CL
288
3.03%
F3H
278
2.93%
POD
256
2.69%
T3O
255
2.68%
SGD
207
2.18%
DWF4/CYP90B1
205
2.16%
CAD
180
1.89%
F3'H/CYP75B
175
1.84%
NMT
172
1.81%
H6H
170
1.79%
STR
164
1.73%
TPS
155
1.63%
CODM/T6ODM
150
1.58%
GES
142
1.49%
LAC
139
1.46%
CAS
137
1.44%
BR6OX2/CYP85A2
120
1.26%
CYP71
120
1.26%
HCT
114
1.2%
TAT
111
1.17%
CYP90D1
107
1.13%
TRI/TRII
98
1.03%
IFR
97
1.02%
CSE
96
1.01%
SMT1/SMT2/SMT3
94
0.99%
7DLH
91
0.96%
BBE
86
0.91%
T16H
84
0.88%
COMT
84
0.88%
GS
78
0.82%
IO
77
0.81%
G8O/G8H
77
0.81%
PMT
76
0.8%
RAS
75
0.79%
FNS
69
0.73%
PYKS
62
0.65%
16OMT
59
0.62%
BR6OX1/CYP85A1
54
0.57%
NCS
53
0.56%
CCR
53
0.56%
ANR
52
0.55%
8HGO
51
0.54%
F3'5'H/CYP75A
51
0.54%
F5H/CYP84A
51
0.54%
LAMT
45
0.47%
COR
44
0.46%
SLS
39
0.41%
PAL
39
0.41%
CPD/CYP90A1
35
0.37%
DFR
32
0.34%
ROT3/CYP90C1
32
0.34%
ANS/LDOX
28
0.29%
CHS
25
0.26%
CYP51G1
24
0.25%
AACT
24
0.25%
FPPS
19
0.2%
CNMT
17
0.18%
GGPPS
16
0.17%
SQS/FDFT1
15
0.16%
MVD
15
0.16%
MPO
14
0.15%
ISY
13
0.14%
CYP719
13
0.14%
HMGR
13
0.14%
CYP80B1
12
0.13%
HDR/IspH
12
0.13%
FLS
11
0.12%
CCoAOMT
11
0.12%
CPR
11
0.12%
TDC
10
0.11%
TYDC_DDC
10
0.11%
SQE
10
0.11%
XMT_MXMT_DXMT
9
0.09%
DET2
9
0.09%
DXS
8
0.08%
ODC
7
0.07%
CHI
7
0.07%
HPPR
7
0.07%
MVK
7
0.07%
6OMT_4OMT_SOMT
6
0.06%
DWF1
5
0.05%
SMO1/SMO2
5
0.05%
PMK
5
0.05%
DWF7
4
0.04%
FK
4
0.04%
HMGS
4
0.04%
MCT/IspD
4
0.04%
CPI1
3
0.03%
CMK/IspE
3
0.03%
HDS/IspG
3
0.03%
ADC
2
0.02%
DWF5
2
0.02%
MDS/IspF
2
0.02%
DXR
2
0.02%
CYP80F1
1
0.01%
HYD1
1
0.01%
IDI
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1237 | 21 | BAHD (464) | View species results |
| Alkaloid pathway | 996 | 24 | 7DLGT (192) | View species results |
| Phenylpropanoid pathway | 750 | 12 | POD (221) | View species results |
| Flavonoid pathway | 509 | 13 | UFGT (307) | View species results |
| Rosmarinic acid pathway | 370 | 7 | C4H (125) | View species results |
| Steroid pathway | 224 | 14 | CAS (116) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3333 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 761 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| prunus_yedoensis_CYE_r3.1SPE0_g191140.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE0_g191160.1 | Terpenoid | TPS | medium | pass | TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE3_g027270.1 | Terpenoid | TPS | medium | pass | TPS__00110__sp_G0Y7D1_TPS1_LITCU |
| prunus_yedoensis_CYE_r3.1SPE3_g027290.1 | Terpenoid | TPS | medium | pass | TPS__00110__sp_G0Y7D1_TPS1_LITCU |
| prunus_yedoensis_CYE_r3.1SPE3_g028350.1 | Terpenoid | TPS | low | borderline | TPS__00144__sp_M4HY08_MPIM1_PINBN |
| prunus_yedoensis_CYE_r3.1SPE3_g028380.1 | Terpenoid | TPS | low | borderline | TPS__00146__sp_M4HYC8_MPIM1_PINCO |
| prunus_yedoensis_CYE_r3.1SPE3_g028390.1 | Terpenoid | TPS | low | borderline | TPS__00146__sp_M4HYC8_MPIM1_PINCO |
| prunus_yedoensis_CYE_r3.1SPE4_g009330.1 | Terpenoid | TPS | medium | pass | TPS__00059__sp_B9RXW0_TPS7_RICCO |
| prunus_yedoensis_CYE_r3.1SPE4_g009560.1 | Terpenoid | TPS | medium | pass | TPS__00059__sp_B9RXW0_TPS7_RICCO |
| prunus_yedoensis_CYE_r3.1SPE4_g009780.1 | Terpenoid | TPS | medium | pass | TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC |
| prunus_yedoensis_CYE_r3.1SPE4_g009980.1 | Terpenoid | TPS | medium | pass | TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC |
| prunus_yedoensis_CYE_r3.1SPE4_g017230.1 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| prunus_yedoensis_CYE_r3.1SPE4_g017240.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g017260.1 | Terpenoid | TPS | medium | pass | TPS__00114__sp_G5CV45_TPS32_SOLLC |
| prunus_yedoensis_CYE_r3.1SPE4_g017270.1 | Terpenoid | TPS | medium | pass | TPS__00114__sp_G5CV45_TPS32_SOLLC |
| prunus_yedoensis_CYE_r3.1SPE4_g017280.1 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| prunus_yedoensis_CYE_r3.1SPE4_g017290.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g017300.1 | Terpenoid | TPS | medium | pass | TPS__00124__sp_I6RAQ6_TPS1_MATCR |
| prunus_yedoensis_CYE_r3.1SPE4_g017310.1 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| prunus_yedoensis_CYE_r3.1SPE4_g017320.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g017330.1 | Terpenoid | TPS | medium | pass | TPS__00114__sp_G5CV45_TPS32_SOLLC |
| prunus_yedoensis_CYE_r3.1SPE4_g017340.1 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| prunus_yedoensis_CYE_r3.1SPE4_g017350.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g017360.1 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| prunus_yedoensis_CYE_r3.1SPE4_g017370.1 | Terpenoid | TPS | medium | pass | TPS__00025__sp_A0A1V0QSG6_TS4FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g017730.1 | Terpenoid | TPS | medium | pass | TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g017740.1 | Terpenoid | TPS | medium | pass | TPS__00025__sp_A0A1V0QSG6_TS4FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g017750.1 | Terpenoid | TPS | low | borderline | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g017760.1 | Terpenoid | TPS | medium | pass | TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g017770.1 | Terpenoid | TPS | medium | pass | TPS__00128__sp_J7LMP2_TPS5_PHYDL |
| prunus_yedoensis_CYE_r3.1SPE4_g017780.1 | Terpenoid | TPS | medium | pass | TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g017790.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g017830.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g017850.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g018050.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g018080.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g018090.1 | Terpenoid | TPS | medium | pass | TPS__00124__sp_I6RAQ6_TPS1_MATCR |
| prunus_yedoensis_CYE_r3.1SPE4_g018140.1 | Terpenoid | TPS | medium | pass | TPS__00018__sp_A0A1V0QSF3_TS8FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g018150.1 | Terpenoid | TPS | medium | pass | TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g018190.1 | Terpenoid | TPS | medium | pass | TPS__00025__sp_A0A1V0QSG6_TS4FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g018200.1 | Terpenoid | TPS | medium | pass | TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g018260.1 | Terpenoid | TPS | medium | pass | TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g018320.1 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| prunus_yedoensis_CYE_r3.1SPE4_g018350.1 | Terpenoid | TPS | medium | pass | TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g018360.1 | Terpenoid | TPS | medium | pass | TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g020040.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g020080.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g020100.1 | Terpenoid | TPS | medium | pass | TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g020110.1 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| prunus_yedoensis_CYE_r3.1SPE4_g022960.1 | Terpenoid | TPS | medium | pass | TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC |