PlantSME Plant secondary metabolism enzyme database

Pyrus betuleafolia (pyrus_betuleafolia)

Imported from atlas release summary for Pyrus betuleafolia.

2348
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.49% Alkaloid pathway 23.55% Phenylpropanoid pathway 21.47% Flavonoid pathway 12.9% Rosmarinic acid pathway 7.96% Steroid pathway 5.62%
Family Distribution
C3'H/CYP98A 5.65% C4H 5.59% BAHD 5.24% UGT 4.38% 7DLGT 3.9% ROT3/CYP90C1 3.88% POD 3.82% IFS 3.61%
Other Families 63.92%
More Families (98)
UFGT 222 3.53% CYP76 218 3.47% F3H 200 3.18% T3O 180 2.87% 4CL 165 2.63% DWF4/CYP90B1 129 2.05% H6H 126 2.01% NMT 116 1.85% F3'H/CYP75B 111 1.77% CAD 109 1.74% BR6OX2/CYP85A2 103 1.64% STR 92 1.46% CODM/T6ODM 88 1.4% CAS 73 1.16% GS 72 1.15% TRI/TRII 72 1.15% LAC 72 1.15% CYP71 72 1.15% CSE 65 1.03% CYP90D1 65 1.03% SGD 64 1.02% IO 63 1.0% HCT 62 0.99% IFR 59 0.94% TAT 58 0.92% PYKS 56 0.89% 7DLH 56 0.89% COMT 56 0.89% SMT1/SMT2/SMT3 54 0.86% ANR 51 0.81% RAS 50 0.8% TPS 47 0.75% PMT 45 0.72% GES 45 0.72% LAMT 44 0.7% CCR 41 0.65% BR6OX1/CYP85A1 41 0.65% SLS 38 0.6% G8O/G8H 37 0.59% BBE 37 0.59% T16H 36 0.57% NCS 36 0.57% F3'5'H/CYP75A 36 0.57% FNS 34 0.54% F5H/CYP84A 34 0.54% 16OMT 33 0.53% DFR 32 0.51% COR 28 0.45% CYP51G1 26 0.41% SQE 25 0.4% PAL 18 0.29% CHS 18 0.29% 8HGO 16 0.25% ANS/LDOX 16 0.25% MPO 13 0.21% ISY 12 0.19% CCoAOMT 12 0.19% CPD/CYP90A1 12 0.19% HMGR 12 0.19% CHI 11 0.18% SQS/FDFT1 11 0.18% GGPPS 11 0.18% CNMT 10 0.16% CYP80B1 10 0.16% AACT 10 0.16% TYDC_DDC 9 0.14% CYP719 9 0.14% CPR 9 0.14% FPPS 9 0.14% HPPR 7 0.11% DET2 7 0.11% DXS 7 0.11% MVD 7 0.11% SMO1/SMO2 6 0.1% HMGS 6 0.1% TDC 5 0.08% ADC 5 0.08% FLS 5 0.08% MVK 5 0.08% MCT/IspD 5 0.08% DXR 5 0.08% 6OMT_4OMT_SOMT 4 0.06% HYD1 4 0.06% FK 4 0.06% DWF7 4 0.06% XMT_MXMT_DXMT 3 0.05% CYP80F1 3 0.05% ODC 2 0.03% DWF1 2 0.03% CPI1 2 0.03% DWF5 2 0.03% HDR/IspH 2 0.03% HDS/IspG 2 0.03% IDI 2 0.03% CMK/IspE 2 0.03% MDS/IspF 2 0.03% PMK 2 0.03% GPPS 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 669 19 UGT (244) View species results
Alkaloid pathway 553 24 7DLGT (131) View species results
Phenylpropanoid pathway 504 12 POD (212) View species results
Flavonoid pathway 303 12 UFGT (201) View species results
Rosmarinic acid pathway 187 7 C4H (75) View species results
Steroid pathway 132 14 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2456 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 441 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
GWHPAAYT040652 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAYT043541 Rosmarinic Acid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
GWHPAAYT045469 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GWHPAAYT045807 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
GWHPAAYT046280 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
GWHPAAYT050543 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
GWHPAAYT052355 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
GWHPAAYT053337 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
GWHPAAYT054558 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
GWHPAAYT055456 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
GWHPAAYT056372 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAYT056409 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAYT056410 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GWHPAAYT056447 Rosmarinic Acid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
GWHPAAYT058542 Rosmarinic Acid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ