PlantSME Plant secondary metabolism enzyme database

Pyrus betuleafolia (pyrus_betuleafolia)

Imported from atlas release summary for Pyrus betuleafolia.

2348
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.49% Alkaloid pathway 23.55% Phenylpropanoid pathway 21.47% Flavonoid pathway 12.9% Rosmarinic acid pathway 7.96% Steroid pathway 5.62%
Family Distribution
C3'H/CYP98A 5.65% C4H 5.59% BAHD 5.24% UGT 4.38% 7DLGT 3.9% ROT3/CYP90C1 3.88% POD 3.82% IFS 3.61%
Other Families 63.92%
More Families (98)
UFGT 222 3.53% CYP76 218 3.47% F3H 200 3.18% T3O 180 2.87% 4CL 165 2.63% DWF4/CYP90B1 129 2.05% H6H 126 2.01% NMT 116 1.85% F3'H/CYP75B 111 1.77% CAD 109 1.74% BR6OX2/CYP85A2 103 1.64% STR 92 1.46% CODM/T6ODM 88 1.4% CAS 73 1.16% GS 72 1.15% TRI/TRII 72 1.15% LAC 72 1.15% CYP71 72 1.15% CSE 65 1.03% CYP90D1 65 1.03% SGD 64 1.02% IO 63 1.0% HCT 62 0.99% IFR 59 0.94% TAT 58 0.92% PYKS 56 0.89% 7DLH 56 0.89% COMT 56 0.89% SMT1/SMT2/SMT3 54 0.86% ANR 51 0.81% RAS 50 0.8% TPS 47 0.75% PMT 45 0.72% GES 45 0.72% LAMT 44 0.7% CCR 41 0.65% BR6OX1/CYP85A1 41 0.65% SLS 38 0.6% G8O/G8H 37 0.59% BBE 37 0.59% T16H 36 0.57% NCS 36 0.57% F3'5'H/CYP75A 36 0.57% FNS 34 0.54% F5H/CYP84A 34 0.54% 16OMT 33 0.53% DFR 32 0.51% COR 28 0.45% CYP51G1 26 0.41% SQE 25 0.4% PAL 18 0.29% CHS 18 0.29% 8HGO 16 0.25% ANS/LDOX 16 0.25% MPO 13 0.21% ISY 12 0.19% CCoAOMT 12 0.19% CPD/CYP90A1 12 0.19% HMGR 12 0.19% CHI 11 0.18% SQS/FDFT1 11 0.18% GGPPS 11 0.18% CNMT 10 0.16% CYP80B1 10 0.16% AACT 10 0.16% TYDC_DDC 9 0.14% CYP719 9 0.14% CPR 9 0.14% FPPS 9 0.14% HPPR 7 0.11% DET2 7 0.11% DXS 7 0.11% MVD 7 0.11% SMO1/SMO2 6 0.1% HMGS 6 0.1% TDC 5 0.08% ADC 5 0.08% FLS 5 0.08% MVK 5 0.08% MCT/IspD 5 0.08% DXR 5 0.08% 6OMT_4OMT_SOMT 4 0.06% HYD1 4 0.06% FK 4 0.06% DWF7 4 0.06% XMT_MXMT_DXMT 3 0.05% CYP80F1 3 0.05% ODC 2 0.03% DWF1 2 0.03% CPI1 2 0.03% DWF5 2 0.03% HDR/IspH 2 0.03% HDS/IspG 2 0.03% IDI 2 0.03% CMK/IspE 2 0.03% MDS/IspF 2 0.03% PMK 2 0.03% GPPS 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 669 19 UGT (244) View species results
Alkaloid pathway 553 24 7DLGT (131) View species results
Phenylpropanoid pathway 504 12 POD (212) View species results
Flavonoid pathway 303 12 UFGT (201) View species results
Rosmarinic acid pathway 187 7 C4H (75) View species results
Steroid pathway 132 14 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2456 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 441 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
GWHPAAYT000070 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
GWHPAAYT000819 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
GWHPAAYT000936 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
GWHPAAYT000940 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
GWHPAAYT000943 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
GWHPAAYT002135 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
GWHPAAYT002165 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
GWHPAAYT002212 Alkaloid NMT low borderline NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
GWHPAAYT002610 Alkaloid NMT low borderline NMT__00040__sp_Q84WW6_ASHH1_ARATH
GWHPAAYT002611 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
GWHPAAYT004470 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
GWHPAAYT005069 Alkaloid NMT low borderline NMT__00059__sp_Q9M571_PEAMT_SPIOL
GWHPAAYT005171 Alkaloid NMT medium pass NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
GWHPAAYT007086 Alkaloid NMT low borderline NMT__00021__sp_O64827_SUVR5_ARATH
GWHPAAYT007560 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
GWHPAAYT007595 Alkaloid NMT low borderline NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
GWHPAAYT009487 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
GWHPAAYT009815 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
GWHPAAYT009967 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
GWHPAAYT010927 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
GWHPAAYT011175 Alkaloid NMT medium borderline NMT__00018__sp_I1M2U5_NAMT1_SOYBN
GWHPAAYT011179 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
GWHPAAYT012959 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
GWHPAAYT013609 Alkaloid NMT medium pass NMT__00030__sp_Q43088_RBCMT_PEA
GWHPAAYT014180 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
GWHPAAYT014602 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
GWHPAAYT014603 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
GWHPAAYT015210 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
GWHPAAYT016029 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
GWHPAAYT016126 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
GWHPAAYT016611 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
GWHPAAYT017862 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
GWHPAAYT018331 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
GWHPAAYT018408 Alkaloid NMT low borderline NMT__00033__sp_Q5QD03_SUVH3_CHLRE
GWHPAAYT019318 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
GWHPAAYT019527 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
GWHPAAYT020481 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
GWHPAAYT020641 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
GWHPAAYT020688 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
GWHPAAYT020766 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
GWHPAAYT021147 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
GWHPAAYT021347 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
GWHPAAYT022007 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
GWHPAAYT022155 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
GWHPAAYT022987 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
GWHPAAYT023435 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
GWHPAAYT024428 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
GWHPAAYT025050 Alkaloid NMT medium pass NMT__00030__sp_Q43088_RBCMT_PEA
GWHPAAYT025478 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
GWHPAAYT025632 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH