Quercus robur (quercus_robur)
Imported from atlas release summary for Quercus robur.
2031
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2031
Candidate Genes
C4H
7.06%
C3'H/CYP98A
6.22%
UGT
5.7%
7DLGT
5.28%
UFGT
5.14%
CYP76
4.32%
BAHD
4.03%
IFS
3.76%
Other Families
58.49%
More Families (95)
POD
164
3.42%
T3O
156
3.26%
DWF4/CYP90B1
126
2.63%
F3H
112
2.34%
F3'H/CYP75B
105
2.19%
CAD
101
2.11%
4CL
96
2.0%
CAS
96
2.0%
BR6OX2/CYP85A2
81
1.69%
CODM/T6ODM
79
1.65%
LAC
72
1.5%
STR
69
1.44%
TPS
69
1.44%
TRI/TRII
68
1.42%
GES
66
1.38%
CYP71
62
1.29%
NMT
60
1.25%
H6H
57
1.19%
T16H
57
1.19%
G8O/G8H
56
1.17%
SGD
51
1.06%
IFR
50
1.04%
SMT1/SMT2/SMT3
45
0.94%
F3'5'H/CYP75A
42
0.88%
FNS
40
0.84%
IO
37
0.77%
GS
36
0.75%
CYP90D1
35
0.73%
BR6OX1/CYP85A1
33
0.69%
LAMT
31
0.65%
HCT
31
0.65%
NCS
30
0.63%
COMT
30
0.63%
7DLH
29
0.61%
BBE
28
0.58%
CSE
25
0.52%
8HGO
24
0.5%
DFR
23
0.48%
PMT
22
0.46%
F5H/CYP84A
22
0.46%
ANR
21
0.44%
PYKS
20
0.42%
SLS
20
0.42%
RAS
19
0.4%
CCR
18
0.38%
CPD/CYP90A1
18
0.38%
16OMT
17
0.35%
COR
16
0.33%
ANS/LDOX
16
0.33%
TAT
16
0.33%
MPO
14
0.29%
CYP51G1
13
0.27%
CYP719
12
0.25%
CCoAOMT
12
0.25%
ISY
11
0.23%
CNMT
10
0.21%
6OMT_4OMT_SOMT
8
0.17%
TYDC_DDC
8
0.17%
HPPR
8
0.17%
ROT3/CYP90C1
8
0.17%
SQE
7
0.15%
GGPPS
7
0.15%
PAL
6
0.13%
XMT_MXMT_DXMT
5
0.1%
CHS
5
0.1%
SQS/FDFT1
5
0.1%
HDR/IspH
5
0.1%
CYP80B1
4
0.08%
CPR
4
0.08%
DET2
4
0.08%
FPPS
4
0.08%
AACT
4
0.08%
MVD
4
0.08%
DXS
3
0.06%
MCT/IspD
3
0.06%
MVK
3
0.06%
TDC
2
0.04%
CYP80F1
2
0.04%
CHI
2
0.04%
FLS
2
0.04%
SMO1/SMO2
2
0.04%
HMGR
2
0.04%
PMK
2
0.04%
MDS/IspF
2
0.04%
ODC
1
0.02%
ADC
1
0.02%
DWF1
1
0.02%
HYD1
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
HDS/IspG
1
0.02%
DXR
1
0.02%
CMK/IspE
1
0.02%
HMGS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 588 | 18 | UGT (258) | View species results |
| Alkaloid pathway | 502 | 26 | 7DLGT (143) | View species results |
| Phenylpropanoid pathway | 365 | 12 | POD (151) | View species results |
| Flavonoid pathway | 311 | 12 | UFGT (231) | View species results |
| Rosmarinic acid pathway | 137 | 7 | C4H (76) | View species results |
| Steroid pathway | 128 | 12 | CAS (82) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1941 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 243 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Qrob07G0013010 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Qrob07G0013020 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Qrob07G0013830 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Qrob07G0013840 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Qrob07G0013850 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Qrob08G0006690 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Qrob08G0007890 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Qrob08G0021000 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| Qrob09G0006720 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| Qrob09G0013400 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Qrob09G0013410 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Qrob09G0013420 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Qrob10G0000980 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Qrob10G0004530 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Qrob10G0004550 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Qrob11G0003990 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Qrob12G0012640 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| QrobQrob_H2.3_Sc00000300002530 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |