Regmatodon serrulatus (regmatodon_serrulatus)
Imported from atlas release summary for Regmatodon serrulatus.
620
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
620
Candidate Genes
C4H
6.94%
POD
5.62%
C3'H/CYP98A
5.56%
BAHD
5.43%
4CL
4.89%
CYP76
4.17%
NMT
3.74%
IFS
3.26%
Other Families
60.39%
More Families (95)
PAL
42
2.54%
F3H
40
2.42%
T3O
39
2.36%
DWF4/CYP90B1
38
2.29%
IFR
37
2.23%
STR
35
2.11%
F3'H/CYP75B
34
2.05%
BR6OX2/CYP85A2
34
2.05%
UGT
34
2.05%
GS
33
1.99%
UFGT
31
1.87%
7DLGT
30
1.81%
CODM/T6ODM
29
1.75%
PYKS
25
1.51%
G8O/G8H
24
1.45%
SMT1/SMT2/SMT3
20
1.21%
COMT
19
1.15%
CAD
18
1.09%
CYP71
18
1.09%
TRI/TRII
17
1.03%
F3'5'H/CYP75A
17
1.03%
H6H
16
0.97%
SLS
15
0.91%
CHS
14
0.85%
IO
13
0.79%
T16H
13
0.79%
CAS
13
0.79%
CYP90D1
12
0.72%
7DLH
11
0.66%
16OMT
11
0.66%
FNS
11
0.66%
CSE
11
0.66%
CPD/CYP90A1
11
0.66%
NCS
10
0.6%
RAS
10
0.6%
HCT
9
0.54%
LAC
9
0.54%
CNMT
8
0.48%
8HGO
8
0.48%
SGD
8
0.48%
TDC
7
0.42%
PMT
7
0.42%
LAMT
7
0.42%
COR
7
0.42%
SQS/FDFT1
7
0.42%
BBE
6
0.36%
CCR
6
0.36%
F5H/CYP84A
6
0.36%
AACT
6
0.36%
MPO
5
0.3%
DFR
5
0.3%
ANR
5
0.3%
CPR
5
0.3%
GGPPS
5
0.3%
CYP719
4
0.24%
CYP80B1
4
0.24%
CHI
4
0.24%
TAT
4
0.24%
ROT3/CYP90C1
4
0.24%
BR6OX1/CYP85A1
4
0.24%
DWF5
4
0.24%
MVD
4
0.24%
FLS
3
0.18%
ANS/LDOX
3
0.18%
DET2
3
0.18%
SQE
3
0.18%
HDS/IspG
3
0.18%
MVK
3
0.18%
ADC
2
0.12%
TYDC_DDC
2
0.12%
GES
2
0.12%
6OMT_4OMT_SOMT
2
0.12%
CCoAOMT
2
0.12%
HPPR
2
0.12%
CYP51G1
2
0.12%
SMO1/SMO2
2
0.12%
MCT/IspD
2
0.12%
FPPS
2
0.12%
HDR/IspH
2
0.12%
TPS
2
0.12%
XMT_MXMT_DXMT
1
0.06%
ISY
1
0.06%
HYD1
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
FK
1
0.06%
DWF1
1
0.06%
MDS/IspF
1
0.06%
GPPS
1
0.06%
DXS
1
0.06%
IDI
1
0.06%
DXR
1
0.06%
HMGS
1
0.06%
HMGR
1
0.06%
CMK/IspE
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 166 | 11 | POD (87) | View species results |
| Terpenoid pathway | 147 | 18 | BAHD (57) | View species results |
| Alkaloid pathway | 126 | 20 | NMT (25) | View species results |
| Flavonoid pathway | 87 | 14 | UFGT (28) | View species results |
| Rosmarinic acid pathway | 60 | 6 | C4H (21) | View species results |
| Steroid pathway | 34 | 12 | CAS (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 633 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 109 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Rser1585790221340 | Alkaloid | CODM/T6ODM | medium | borderline |
| Rser1585960226960 | Alkaloid | CODM/T6ODM | medium | borderline |
| Rser1585960227140 | Alkaloid | CODM/T6ODM | medium | borderline |
| Rser1586590243920 | Alkaloid | CODM/T6ODM | medium | borderline |
| Rser1586820245980 | Alkaloid | CODM/T6ODM | medium | borderline |
| Rser1586820246080 | Alkaloid | CODM/T6ODM | medium | borderline |
| Rser1594450254670 | Alkaloid | CODM/T6ODM | medium | borderline |
| Rser1575970070910 | Alkaloid | COR | medium | pass |
| Rser1579220095160 | Alkaloid | COR | medium | pass |
| Rser1580230106740 | Alkaloid | COR | medium | pass |
| Rser1580440110570 | Alkaloid | COR | medium | pass |
| Rser1582860151550 | Alkaloid | COR | medium | pass |
| Rser1584510187360 | Alkaloid | COR | medium | pass |
| Rser1586590243620 | Alkaloid | COR | medium | pass |
| Rser1550640023040 | Alkaloid | CYP719 | medium | borderline |
| Rser1566410042110 | Alkaloid | CYP719 | medium | borderline |
| Rser1585460213650 | Alkaloid | CYP719 | medium | borderline |
| Rser1586420239900 | Alkaloid | CYP719 | low | borderline |
| Rser1579230095380 | Alkaloid | CYP80B1 | medium | borderline |
| Rser1582580143800 | Alkaloid | CYP80B1 | medium | borderline |
| Rser1582680147240 | Alkaloid | CYP80B1 | medium | borderline |
| Rser1587310252480 | Alkaloid | CYP80B1 | medium | borderline |
| Rser1119870001300 | Alkaloid | G8O/G8H | low | borderline |
| Rser1555680027590 | Alkaloid | G8O/G8H | low | borderline |
| Rser1567310044720 | Alkaloid | G8O/G8H | low | borderline |
| Rser1572760057050 | Alkaloid | G8O/G8H | medium | pass |
| Rser1573110058430 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1573110058440 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1576610075070 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1578020084410 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1579230095390 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1579660099630 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1580620113230 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1581510123740 | Alkaloid | G8O/G8H | medium | pass |
| Rser1583610166830 | Alkaloid | G8O/G8H | low | borderline |
| Rser1583640167710 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1584740194910 | Alkaloid | G8O/G8H | low | borderline |
| Rser1585200207000 | Alkaloid | G8O/G8H | low | borderline |
| Rser1585330211630 | Alkaloid | G8O/G8H | low | borderline |
| Rser1585450213400 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1585460213660 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1585460213680 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1585510214530 | Alkaloid | G8O/G8H | medium | pass |
| Rser1585580216890 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1586000228440 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1586460240710 | Alkaloid | G8O/G8H | medium | borderline |
| Rser1582570143200 | Alkaloid | GES | low | borderline |
| Rser1583130156710 | Alkaloid | GES | medium | pass |
| Rser1389600002650 | Alkaloid | GS | low | borderline |
| Rser1470390006670 | Alkaloid | GS | low | borderline |