Rhododendron griersonianum (rhododendron_griersonianum)
Imported from atlas release summary for Rhododendron griersonianum.
2062
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2062
Candidate Genes
C4H
6.22%
C3'H/CYP98A
5.91%
BAHD
5.72%
UGT
4.56%
4CL
4.05%
CYP76
3.92%
IFS
3.68%
7DLGT
3.48%
Other Families
62.46%
More Families (97)
POD
187
3.32%
F3H
180
3.2%
T3O
167
2.97%
F3'H/CYP75B
131
2.33%
DWF4/CYP90B1
130
2.31%
NMT
129
2.29%
UFGT
121
2.15%
STR
116
2.06%
CAD
109
1.94%
BR6OX2/CYP85A2
108
1.92%
CODM/T6ODM
105
1.86%
H6H
86
1.53%
CAS
81
1.44%
GS
72
1.28%
LAC
68
1.21%
CYP71
66
1.17%
IFR
65
1.15%
TPS
64
1.14%
TRI/TRII
59
1.05%
GES
59
1.05%
SGD
56
0.99%
HCT
55
0.98%
G8O/G8H
52
0.92%
CSE
52
0.92%
CYP90D1
52
0.92%
IO
49
0.87%
SMT1/SMT2/SMT3
49
0.87%
RAS
46
0.82%
7DLH
44
0.78%
T16H
43
0.76%
PYKS
40
0.71%
ANR
40
0.71%
TAT
40
0.71%
BR6OX1/CYP85A1
37
0.66%
SLS
34
0.6%
F5H/CYP84A
34
0.6%
BBE
33
0.59%
F3'5'H/CYP75A
33
0.59%
COMT
33
0.59%
8HGO
30
0.53%
FNS
28
0.5%
PMT
27
0.48%
CPD/CYP90A1
26
0.46%
COR
24
0.43%
CCR
23
0.41%
16OMT
21
0.37%
CYP51G1
21
0.37%
CYP80B1
19
0.34%
DFR
19
0.34%
MPO
17
0.3%
AACT
17
0.3%
CHS
16
0.28%
NCS
15
0.27%
LAMT
15
0.27%
ANS/LDOX
14
0.25%
CCoAOMT
14
0.25%
PAL
12
0.21%
ROT3/CYP90C1
12
0.21%
HDR/IspH
12
0.21%
GGPPS
12
0.21%
CPR
11
0.2%
SQS/FDFT1
11
0.2%
DWF1
11
0.2%
FPPS
11
0.2%
CNMT
10
0.18%
MVD
10
0.18%
TYDC_DDC
9
0.16%
HPPR
9
0.16%
CHI
8
0.14%
SQE
7
0.12%
DXS
7
0.12%
HMGS
7
0.12%
CYP719
6
0.11%
SMO1/SMO2
6
0.11%
HDS/IspG
6
0.11%
ODC
5
0.09%
MVK
5
0.09%
ISY
4
0.07%
CYP80F1
4
0.07%
DWF7
4
0.07%
DET2
4
0.07%
FK
4
0.07%
IDI
4
0.07%
MCT/IspD
4
0.07%
HMGR
4
0.07%
PMK
4
0.07%
GPPS
4
0.07%
ADC
3
0.05%
TDC
3
0.05%
6OMT_4OMT_SOMT
3
0.05%
FLS
3
0.05%
HYD1
2
0.04%
XMT_MXMT_DXMT
1
0.02%
CPI1
1
0.02%
CMK/IspE
1
0.02%
DXR
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 692 | 21 | BAHD (248) | View species results |
| Alkaloid pathway | 445 | 25 | 7DLGT (62) | View species results |
| Phenylpropanoid pathway | 392 | 12 | POD (150) | View species results |
| Rosmarinic acid pathway | 220 | 7 | C4H (104) | View species results |
| Flavonoid pathway | 191 | 13 | UFGT (87) | View species results |
| Steroid pathway | 122 | 12 | CAS (64) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2179 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 423 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| KAG5555923.1_rhododendron_griersonianum | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG5555934.1_rhododendron_griersonianum | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG5555941.1_rhododendron_griersonianum | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG5556336.1_rhododendron_griersonianum | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG5557367.1_rhododendron_griersonianum | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG5557556.1_rhododendron_griersonianum | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG5558690.1_rhododendron_griersonianum | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG5559771.1_rhododendron_griersonianum | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG5560916.1_rhododendron_griersonianum | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG5562936.1_rhododendron_griersonianum | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG5562937.1_rhododendron_griersonianum | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG5562970.1_rhododendron_griersonianum | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG5566352.1_rhododendron_griersonianum | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG5566449.1_rhododendron_griersonianum | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG5566573.1_rhododendron_griersonianum | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG5566683.1_rhododendron_griersonianum | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |